DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and SWEET4

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_566829.1 Gene:SWEET4 / 822424 AraportID:AT3G28007 Length:251 Species:Arabidopsis thaliana


Alignment Length:200 Identity:56/200 - (28%)
Similarity:96/200 - (48%) Gaps:11/200 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGV-LTNEQSIVLVNIIGSTLF 79
            :.::|.|||.........:||...:....|::...|:|:.|:.||: :....|::::.|.|:.|.
plant    17 VISLFLFLSPIPTFITIYKKKKVEEYKADPYLATVLNCALWVFYGLPMVQPDSLLVITINGTGLA 81

  Fly    80 --LVYTLIYYVFTVNKRACVKQFGFVLTVLVVVIVYTNRL-----EDQRDRMIHVTGIVCCIVTV 137
              |||..|::.|:...|........:..::.|.||.|..|     .:||...:   ||.|.|...
plant    82 IELVYLAIFFFFSP
TSRKVKVGLWLIGEMVFVGIVATCTLLLFHTHNQRSSFV---GIFCVIFVS 143

  Fly   138 CFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQLG 202
            ..:.|||..:..||:.|:.:.:|..|...:|:..:.|:||.::..|.||.|.|.||.:...:||.
plant   144 LMYIAPLTIMSKVIKTKSVKYMPFSLSLANFLNGVVWVIYALIKFDLFILIGNGLGTVSGAVQLI 208

  Fly   203 LFVLY 207
            |:..|
plant   209 LYACY 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 21/80 (26%)
MtN3_slv 126..210 CDD:397278 26/81 (32%)
SWEET4NP_566829.1 MtN3_slv 12..95 CDD:481124 21/77 (27%)
MtN3_slv 132..215 CDD:397278 26/84 (31%)

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