DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slv and SWEET9

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_181439.1 Gene:SWEET9 / 818492 AraportID:AT2G39060 Length:258 Species:Arabidopsis thaliana


Alignment Length:191 Identity:54/191 - (28%)
Similarity:97/191 - (50%) Gaps:7/191 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVL-TNEQSIVLVNIIGSTLFLVYTLI 85
            |||.........:|||:.....:|:||...|.:..|.||:: |:...|:.:|..|..:.:.| |.
plant    24 FLSPVPTFYGIYKKKSSKGFQSIPYICALASATLLLYYGIMKTHAYLIISINTFGCFIEISY-LF 87

  Fly    86 YYVFTVNKRACVKQFGFVLTV----LVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVCFFAAPLAS 146
            .|:....:.|.:.....::..    |.::|:..|.|..::.| :...|.||...::..||:||:.
plant    88 LYILYAPREA
KISTLKLIVICNIGGLGLLILLVNLLVPKQHR-VSTVGWVCAAYSLAVFASPLSV 151

  Fly   147 LLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQLGLFVLY 207
            :..||:.|:.|.:|..|..:..:.::.|..||:||.|.||.:||.||.:..:.|:.|:::|
plant   152 MRKVIKTKSVEYMPFLLSLSLTLNAVMWFFYGLLIKDKFIAMPNILGFLFGVAQMILYMMY 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 20/72 (28%)
MtN3_slv 126..210 CDD:397278 28/82 (34%)
SWEET9NP_181439.1 MtN3_slv 10..97 CDD:397278 20/73 (27%)
MtN3_slv 131..217 CDD:397278 28/82 (34%)

Return to query results.
Submit another query.