DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and slc50a1

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001015865.1 Gene:slc50a1 / 548582 XenbaseID:XB-GENE-970558 Length:214 Species:Xenopus tropicalis


Alignment Length:201 Identity:64/201 - (31%)
Similarity:110/201 - (54%) Gaps:0/201 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSIVLVNI 73
            |||...::.|:..|.||....|..:.|:|..:...:||:...|:...|..||.|..:.::::||:
 Frog     6 LLSGACIVFTLGMFSSGLSDLRVMVAKRSVENIQFLPFLTTDLNNLGWFYYGYLKGDGTLIIVNL 70

  Fly    74 IGSTLFLVYTLIYYVFTVNKRACVKQFGFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVC 138
            ||::|..:|...|.::::.:|..|.|....|.||.:...|........:..::..|:.|.|.|:.
 Frog    71 IGASLQTLYMAAYILYSLERRYVVSQVLVSLGVLFLAHCYFTLWTPDINSRLNQLGLFCSIFTIS 135

  Fly   139 FFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQLGL 203
            .:.:|||.|..:|::|:::.|..||...:|:.|..|::||.:.||.:|.:|||.|.:.|||:..|
 Frog   136 MYLSPLADLAQIIKSKSTKCLSFPLTVATFLTSTSWVLYGWVQSDLYITVPNFPGIVTSLLRFWL 200

  Fly   204 FVLYPP 209
            |..|||
 Frog   201 FSRYPP 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 24/84 (29%)
MtN3_slv 126..210 CDD:397278 33/84 (39%)
slc50a1NP_001015865.1 MtN3_slv 6..91 CDD:397278 24/84 (29%)
MtN3_slv 123..206 CDD:397278 31/82 (38%)

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