DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and slc50a1

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001012515.2 Gene:slc50a1 / 503533 ZFINID:ZDB-GENE-050220-11 Length:219 Species:Danio rerio


Alignment Length:213 Identity:66/213 - (30%)
Similarity:107/213 - (50%) Gaps:0/213 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSIVLVNI 73
            |||...:|.||..|.:|....:|....:|..:...:||:...|:...||.||:|..:.:::.|||
Zfish     6 LLSCACIIFTVGMFTTGLTDLKKMKATQSADNVQFLPFLTTCLNNLGWLYYGLLKGDGTVIFVNI 70

  Fly    74 IGSTLFLVYTLIYYVFTVNKRACVKQFGFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVC 138
            ||:.|..||...|..:|..||....|...:::||.|..||.:.:....:..:...|:.|.:.|:.
Zfish    71 IGAFLQTVYIATYCHYTKEKR
RVYTQTLLMVSVLCVAWVYFSLVISPGEAQLSQLGLTCSVFTIS 135

  Fly   139 FFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQLGL 203
            .:.:|||.||.::|.|:.|.|...|...:|..|..|.:||:.:.|.:|.:||..|...||::..|
Zfish   136 MYLSPLADLLDIMRTKSVERLSFSLTVATFFTSTSWTLYGLQLGDYYIMVPNTPGIFTSLIRFFL 200

  Fly   204 FVLYPPRSYSGHGYKLVE 221
            |..:.........|||::
Zfish   201 FWWFGAVIPQIPSYKLIQ 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 28/84 (33%)
MtN3_slv 126..210 CDD:397278 27/83 (33%)
slc50a1NP_001012515.2 MtN3_slv 5..91 CDD:397278 28/84 (33%)
MtN3_slv 123..204 CDD:397278 27/80 (34%)

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