DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and Slc50a1

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_063137685.1 Gene:Slc50a1 / 295245 RGDID:1308478 Length:250 Species:Rattus norvegicus


Alignment Length:190 Identity:53/190 - (27%)
Similarity:95/190 - (50%) Gaps:5/190 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DSLLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSIVLV 71
            ||.||:..|:.|:..|.:|....|...:.:|..:...:||:...::...||.||||..:.::::|
  Rat     8 DSFLSSACVLFTLGMFSTGLSDLRHMQRTRSVDNIQFLPFLTTDVNNLGWLSYGVLKGDGTLIIV 72

  Fly    72 NIIGSTLFLVYTLIYYVFTVNKRACVKQFGFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVT 136
            |.:|:.|..:|.|.|..::..|.|.:.|...:|.||::...|...|....:..:...|:.|.:.|
  Rat    73 NTVGAVLQTLYILAYLHYSPQKHAVLLQTATLLAVLLLGYGYFWLLVPDLETRLQQLGLFCSVFT 137

  Fly   137 VCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQI-----PNF 191
            :..:.:|||.|..:|:.|:::.|...|...:.:.|..|.|||..:.|.:|.:     |.|
  Rat   138 ISMYLSPLADLAKIIQTKSTQRLSFSLTIATLLSSTSWSIYGFRLKDPYITLFDCRCPTF 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 24/85 (28%)
MtN3_slv 126..210 CDD:397278 20/71 (28%)
Slc50a1XP_063137685.1 None

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