DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and swt-6

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_506464.2 Gene:swt-6 / 187765 WormBaseID:WBGene00011190 Length:221 Species:Caenorhabditis elegans


Alignment Length:185 Identity:46/185 - (24%)
Similarity:83/185 - (44%) Gaps:11/185 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QKKSTGD--SSGVPFICGFLSCSFWLRYGVLTNEQSIVLVNIIGSTLFLVYTLIYYVFTVNKRAC 96
            :|:.|.|  |:.|..|.|.:. |||||:|.:|||.:.:::|.:..|....|...|..:..|::..
 Worm    29 KKRGTSDGFSAVVLIIPGIIQ-SFWLRHGWMTNEWTHIIINTVNLTALSFYISAYAYYQSNRKNL 92

  Fly    97 VKQFGFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVCFFAAPLASLLHVIRAKNSESLPL 161
            :.|  .:..|::|...:........:......|.|.....:......:..:...::...:|.:|.
 Worm    93 IGQ--LISAVIIVKCAFFYVDSHDAEHTNSAMGTVAAGAQILGLGGRVYEMRRAVKLGTTEYIPA 155

  Fly   162 PLIATSFVVS---LQWLIYGILISDSFIQIPNFLGCILSLLQLGLFVLYPPRSYS 213
            .:   .|.||   .|||::||:..:.||...|..|...|.:.|.|:..|||.:::
 Worm   156 FM---QFAVSALMAQWLLFGIVTGNQFIANANVAGLTASAITLYLYFKYPPLTWT 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 21/61 (34%)
MtN3_slv 126..210 CDD:397278 21/86 (24%)
swt-6NP_506464.2 MtN3_slv <141..203 CDD:481124 18/64 (28%)

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