DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and swt-5

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_505449.2 Gene:swt-5 / 187047 WormBaseID:WBGene00010594 Length:239 Species:Caenorhabditis elegans


Alignment Length:210 Identity:44/210 - (20%)
Similarity:93/210 - (44%) Gaps:20/210 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSIVLVN 72
            ||..|:..:..|....|......|:::::|:...:.:|:||..:..:.||||.:...:..::|:.
 Worm    24 SLFLTSTALHAVALITSPVQAVHKWVRRQSSDSDTPIPYICAVIGSALWLRYSIFLRDTKLILLQ 88

  Fly    73 --IIGSTLFLVYTLIYYVFTVNKRACVKQFGFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIV 135
              .:...||.|..||:|  ...:|..::....:...|.::.:|...:.|:..:  ..||.:..  
 Worm    89 TYAVSMQLFFVIALIFY--RTKRRKLIRLMTGIAAALSLLFLYIGNMNDEDGK--EFTGRIAS-- 147

  Fly   136 TVCFFAAPLASLL-------HVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLG 193
                 .|.:|..|       ..:.:|..:.:||..:..::|:.|..::|.|.|.|.::.:.|.:.
 Worm   148 -----GAQIAGSLVCPYLIYKAVTSKCIDFVPLAPVVFTWVMELHAIVYSIGIDDFYMLLANVIF 207

  Fly   194 CILSLLQLGLFVLYP 208
            ..:....|.:|.:||
 Worm   208 FCMDGSLLSMFFVYP 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 21/87 (24%)
MtN3_slv 126..210 CDD:397278 19/90 (21%)
swt-5NP_505449.2 MtN3_slv 35..110 CDD:481124 18/76 (24%)

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