DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and swt-1

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_499901.1 Gene:swt-1 / 186875 WormBaseID:WBGene00019300 Length:299 Species:Caenorhabditis elegans


Alignment Length:202 Identity:70/202 - (34%)
Similarity:120/202 - (59%) Gaps:5/202 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSIVLVNI 73
            :||.:|:.:|:..|..|..||.:..::.:.||.|||||:.|.|..|||||||:|..:..:::||:
 Worm     8 VLSISAITTTIALFFCGIPICMQIRRQGAVGDISGVPFLMGVLGGSFWLRYGLLKMDYVMIIVNV 72

  Fly    74 IGSTLFLVYTLIYYVFTVNKRACVKQFGFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVC 138
            :|......|.:.:.::::.|:....|...|.:.:..::::. .|:...|.:    |::|....:.
 Worm    73 VGVACMAFYCVFFLIYSLPKK
TFTCQLILVTSTIGGMVLWI-ALKPNLDYL----GVICMTFNIM 132

  Fly   139 FFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQLGL 203
            .|.||||.|..|::.:...:||||:...:|:||.||.:||.|:||.:|.|||.:|..|:::||.|
 Worm   133 NFGAPLAGLGVVLKNREVSTLPLPMCVANFLVSSQWCLYGNLVSDIYIIIPNGIGMFLAIVQLAL 197

  Fly   204 FVLYPPR 210
            ||:.|.|
 Worm   198 FVVLPIR 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 29/84 (35%)
MtN3_slv 126..210 CDD:397278 35/83 (42%)
swt-1NP_499901.1 MtN3_slv 7..93 CDD:397278 29/84 (35%)
MtN3_slv 121..206 CDD:397278 36/88 (41%)

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