DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and swt-2

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001343830.1 Gene:swt-2 / 183804 WormBaseID:WBGene00016922 Length:243 Species:Caenorhabditis elegans


Alignment Length:210 Identity:68/210 - (32%)
Similarity:110/210 - (52%) Gaps:14/210 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSIVLVNII 74
            :|..|.:.|:.||.:|..||.:..::...||.||.||:.|.|...||||||.|.|:..::.:|..
 Worm     9 VSIVAFVFTIIQFFTGIPICLQIYRQGHVGDISGFPFLMGTLVLPFWLRYGFLRNDVMLISINCA 73

  Fly    75 GSTLFLVYTLIYYVFTVNKRACVKQFGFV----LTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIV 135
            |..:.:...:.:..|:..|:..:.|...|    ||:|:::....|         :...|.||.::
 Worm    74 GIPIAVFNAMFFLYFSKPKK
YYMTQLSIVTIIILTMLMLIHFNPN---------VQFLGFVCIVL 129

  Fly   136 TVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQ 200
            .:..|.:|||.|..|:|.:...:||..|.....:|...|.:|||||.|.|:.||..:|.::||:|
 Worm   130 NLITFGSPLAGLRVVLRDREVITLPFVLCLVQLIVQCLWNLYGILIQDFFLVIPTAVGIMISLVQ 194

  Fly   201 LGLFVLYPPRSYSGH 215
            |.||::: ||...|:
 Worm   195 LSLFLIF-PRKRDGY 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 27/83 (33%)
MtN3_slv 126..210 CDD:397278 31/83 (37%)
swt-2NP_001343830.1 MtN3_slv 8..93 CDD:481124 27/83 (33%)
MtN3_slv 120..206 CDD:481124 33/86 (38%)

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