DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slv and swt-7

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_504349.1 Gene:swt-7 / 178890 WormBaseID:WBGene00019645 Length:224 Species:Caenorhabditis elegans


Alignment Length:204 Identity:54/204 - (26%)
Similarity:92/204 - (45%) Gaps:13/204 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VISTVFQFLSGAMICRKYIQKKSTGDS-SGVPFICGFLSCSFWLRYGVLTNEQSIVLVNIIGSTL 78
            :.|..|.||...|:...:  |:.|.|. |.|.|:...|..|||||:|.:||:|:.:::|.|....
 Worm    12 IFSIGFTFLPMFMVLDWH--KRGTADGFSSVNFVLPMLVQSFWLRHGYMTNDQTNIIINSINLVF 74

  Fly    79 FLVYTLIYYVFTVNKRACVKQFGFVLTVLVVVIVY----TNRLEDQRDRMIHVTGIVCCIVTVCF 139
            |..|...:..:...::..:.|  .|...|.|.:.:    |:......|.|    |.:.....:..
 Worm    75 FAFYVSAFAYYQPKRK
YLIGQ--IVAAALAVKVAFAYVDTHDSASINDAM----GSMAAGAQIFS 133

  Fly   140 FAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQLGLF 204
            ....:..:...|....:|.:|.......|.:.||||::|||..:.||.|.|..|.::::..|.|:
 Worm   134 LVGGIYEIKRAISMGTTEYIPAGFQFAIFTLILQWLLFGILHGNQFIAISNAAGLLVNIATLALY 198

  Fly   205 VLYPPRSYS 213
            ..|||.:::
 Worm   199 FFYPPLTWT 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 25/79 (32%)
MtN3_slv 126..210 CDD:397278 21/83 (25%)
swt-7NP_504349.1 MtN3_slv 10..90 CDD:481124 25/79 (32%)

Return to query results.
Submit another query.