DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and swt-3

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_502000.1 Gene:swt-3 / 177972 WormBaseID:WBGene00007384 Length:355 Species:Caenorhabditis elegans


Alignment Length:204 Identity:70/204 - (34%)
Similarity:111/204 - (54%) Gaps:9/204 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSIVLVN 72
            :|||..|..:||..|..|..|||:..::|.|.:.||.||:.|.:....|:.||.|.|:.::..|.
 Worm    13 NLLSILAFFTTVGLFFCGIPICRQIWKRKDTKEISGAPFLMGVVGGCCWMTYGWLKNDGTVKWVT 77

  Fly    73 IIGSTLFLVYTLIYYVFTVNK-RACVKQFGF--VLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCI 134
            .....|:..||:.|:..|..| ...:|..|.  :.|.||:.:.:...      ::.|..||||..
 Worm    78 GCQVILYTTYTIFYWCMTKKKLYISLKVLGVIGICTSLVLAVHFFGM------KIFHPLGIVCLT 136

  Fly   135 VTVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLL 199
            :.:..|||||..:..|||...:.:|||||...:|:||.:|.:||:|.:|.::..||.:|.:|:.:
 Worm   137 LNIADFAAPLGGIRVVIRRWATSTLPLPLCIANFLVSTEWFLYGLLKNDFYLIFPNGVGSLLAFI 201

  Fly   200 QLGLFVLYP 208
            ||.||::.|
 Worm   202 QLLLFIVLP 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 30/86 (35%)
MtN3_slv 126..210 CDD:397278 35/83 (42%)
swt-3NP_502000.1 MtN3_slv 13..99 CDD:397278 29/85 (34%)
MtN3_slv 128..213 CDD:397278 35/83 (42%)
EC042_2821 <277..321 CDD:465852
Blue background indicates that the domain is not in the aligned region.

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