DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slv and LOC1276949

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_316361.2 Gene:LOC1276949 / 1276949 VectorBaseID:AGAMI1_006758 Length:228 Species:Anopheles gambiae


Alignment Length:215 Identity:67/215 - (31%)
Similarity:112/215 - (52%) Gaps:15/215 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AVA---YDSLLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTN 64
            |||   |...:..||.|.||.||.||.:......::.:|...|.:||:.|.:.|...:::|.:..
Mosquito     5 AVALQPYKDTVGLTAAIVTVVQFFSGVLALNAIRRQGNTRGFSALPFLGGTVFCLLNIQFGQMLR 69

  Fly    65 EQSIVLVNIIGSTLFLVYTLIYYVFTVN--KRACVKQFGFVLTVLVVVIVYTN----RLEDQRDR 123
            :..::.||.||..|.|:|...:|::|..  |.|...|.|....:...|:.|..    :|.:.|..
Mosquito    70 DDGMIRVNFIGLALNLLYVCGFYLYTEGPAKTAVWGQIGLAGALTAGVLSYVQYEDPQLVEFRFG 134

  Fly   124 MIHVTGIVCCIVTVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQI 188
            :| :||::..:|     ..||..|..:::.|::|.||.|:|....|||..||:|||::..:|:.:
Mosquito   135 LI-LTGLLWTLV-----GMPLLGLGDILKKKSTEGLPFPIIFLGAVVSFAWLLYGIILRSNFLVV 193

  Fly   189 PNFLGCILSLLQLGLFVLYP 208
            .|.:...||.:||.||:::|
Mosquito   194 QNLMALALSAVQLSLFIIFP 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 25/87 (29%)
MtN3_slv 126..210 CDD:397278 29/83 (35%)
LOC1276949XP_316361.2 MtN3_slv 14..95 CDD:481124 24/80 (30%)
MtN3_slv 131..213 CDD:481124 30/87 (34%)

Return to query results.
Submit another query.