DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lig and UBAP2L

DIOPT Version :9

Sequence 1:NP_001260795.1 Gene:lig / 35771 FlyBaseID:FBgn0020279 Length:1417 Species:Drosophila melanogaster
Sequence 2:NP_001362541.1 Gene:UBAP2L / 9898 HGNCID:29877 Length:1115 Species:Homo sapiens


Alignment Length:1341 Identity:347/1341 - (25%)
Similarity:517/1341 - (38%) Gaps:370/1341 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QDASKTDKPEKAQPKATTEQLRIAQITNSTTEDPQINEKVLLLLTMTQRSEEEVCCALNECDYDL 114
            |..::.....|.:|:||.||:|:||:. |...|....|||..|:.:|.::::|...||::|:.|:
Human    16 QPQNQNQTQHKQRPQATAEQIRLAQMI-SDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDV 79

  Fly   115 EAAANFLIEELPQGAFAKYEKKRKNKAANNTADGAAGDGDWADGNGNADRREKSRNRSSNRGGT- 178
            ..|.|.|:|..|.  ...:|...|.|..:...||...:.: .:|..|.||   .|:.|..|||. 
Human    80 NRAINVLLEGNPD--THSWEMVGKKKGVSGQKDGGQTESN-EEGKENRDR---DRDYSRRRGGPP 138

  Fly   179 ---RGSSDSRGWRGRETRENERNQRESREPWSGQNAGQDRGDDRANDNYRGQRNG--GGRS-GPG 237
               ||:|     ||||......::...                     .|||.||  |.:| ||.
Human   139 RRGRGAS-----RGRECMHGALSKPAV---------------------VRGQENGLDGTKSGGPS 177

  Fly   238 GGGRGGGFVSRSGRGGGRMG-GRTGGPRGDRGSGGPGGA-YGSGRGGNANEDHHEVELWDNTIAQ 300
            |.|...|   |.|||.||.| ||.||....:|.|....| |......:.|..:.....|:||...
Human   178 GRGTERG---RRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPANTDDNYGNSSGNTWNNTGHF 239

  Fly   301 NAEKQQQAHDDAWGDWNNEEYEGSLKDSKVFTTSNLAT--QSAANVVSGTGASV----------- 352
            ..:....|...|..:|..|::...|.::|:||.||:::  ..|.||....|..:           
Human   240 EPDDGTSAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPS 304

  Fly   353 TAVPAAAGTEISAPPGLEHQLVQQGSHLEESSSSGPAAVTPPAT--------------------- 396
            |....::..:.|..|.|...||        .|:|...|::.||:                     
Human   305 TMENDSSNLDPSQAPSLAQPLV--------FSNSKQTAISQPASGNTFSHHSMVSMLGKGFGDVG 361

  Fly   397 -LSGSATTP---LLQYSAAVSNPPPQLQSQGTQSGAGTGASAAAGGGAGS---------TPSSFV 448
             ..|.:||.   |.|:..|  ....||.:|.:|||:.|.:|...|....|         .||...
Human   362 EAKGGSTTGSQFLEQFKTA--QALAQLAAQHSQSGSTTTSSWDMGSTTQSPSLVQYDLKNPSDSA 424

  Fly   449 SASPDTFSSAASAAATL--VHQAQKQQQLQQQT-TPIKPSATLSVEQSQYFNSLASQGVSPGSVP 510
            ..||.|...|.:.::|:  |...:|...:...| .|..||:.|..:      |.::..:||||..
Human   425 VHSPFTKRQAFTPSSTMMEVFLQEKSPAVATSTAAPPPPSSPLPSK------STSAPQMSPGSSD 483

  Fly   511 VQSAPAGYAQNPVAAYSQTSTSVGVSQYPNTYANVFASGTAAGAGTAEQSQQQPQIRRARVKLPP 575
            .||:      :|..|                                     |.::::.:.|...
Human   484 NQSS------SPQPA-------------------------------------QQKLKQQKKKASL 505

  Fly   576 PSKIPASAVEMPGDNALNNIGYLDVQFGALDFGTDDGFEPLPEKVGSGFSIDGQQQQQQPDDYQS 640
            .|||||.||||||.   .:|..|::|||||.||:    ||:                  ..||:|
Human   506 TSKIPALAVEMPGS---ADISGLNLQFGALQFGS----EPV------------------LSDYES 545

  Fly   641 KSQQQQQVTLAAGLQSSQISDALNAAGYTSRSTSQQQQGVSSAVNATIDQLTKSDPYGQTGGSGN 705
                    |......|||...:|    |||         .:|..::||             .|..
Human   546 --------TPTTSASSSQAPSSL----YTS---------TASESSSTI-------------SSNQ 576

  Fly   706 AYQNAYQSSGASKTASGFPTTAPGGYSSSTYANVQSSVANSYQQQGYGSYQPSSYQQQAGSGAQS 770
            :.::.|||               |...|:||.:..::....|:|:   |.|...|.....|..|.
Human   577 SQESGYQS---------------GPIQSTTYTSQNNAQGPLYEQR---STQTRRYPSSISSSPQK 623

  Fly   771 GTGAVSGGGGTATQNIPVGGSSSQNSTSVSTSSGVSSNSGSTGNGGVVSGQTGANQAAVSNNNSV 835
            ..        |..:|    |.||..:|.:.|:..|   .|:||:  .|...:.:..:....|.:|
Human   624 DL--------TQAKN----GFSSVQATQLQTTQSV---EGATGS--AVKSDSPSTSSIPPLNETV 671

  Fly   836 SGSSSVSNVTAGVASGNVAGVGGGVSQS-GVSSGVGVPGGSASSVGVNVNNNSSSASSVGAATVA 899
            |.:|.::  |....|.::    ||:|.| .:.:.......|..|...|..::|:|:.....:|:.
Human   672 SAASLLT--TTNQHSSSL----GGLSHSEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLL 730

  Fly   900 QTATGTTAAVLASLTNKNTSSSNSSGSGGSAATTTGNASGQGAGASTGGVGSSSGAGGAGSGGGS 964
            .|:..:.|.:.:|.:..:|:||..|......:.::...||...|.|.|  .:|:......|...:
Human   731 HTSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLG--SNSTVTASTRSSVAT 793

  Fly   965 GSGLVPTNIQ------MVSQYIQT-GLPY-YQQPVYSYEELQMMQQRVPHVQGYYDLNYP-PASL 1020
            .||..|.|:.      :.:.||.. ||.: |...||.|::|||:|.|.|  ..||.:.:| |.:.
Human   794 TSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFP--LDYYSIPFPTPTTP 856

  Fly  1021 GAGRD-NLGSVTYSAMNDGRFARTDNNSSPVGNVSSTMSQQAGSSA----------PMLNVPYAY 1074
            ..||| :|.|..||. :..:|.|.| .|||....:....||..:..          |.|...|:|
Human   857 LTGRDGSLASNPYSG-DLTKFGRGD-ASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSY 919

  Fly  1075 ----FYGG-NVMPGSFQYGTPAIYPQIPAAN---------TASGQQFPKPSYSAGYGSTSYDTLS 1125
                :|.| ..:|.:|||| ||::|..|.::         .||...|.:||   ||||..|:|  
Human   920 TSLPYYTGVPGLPSTFQYG-PAVFPVAPTSSKQHGVNVSVNASATPFQQPS---GYGSHGYNT-- 978

  Fly  1126 QTTQDYSKGGYSSSVNQQSKTQTVSNQSQAGTG-SDLTSSMYGKGHVALNKVNSYEKQSFHSGTP 1189
                     |.|         .|.||     || .|::.|:|.|..      .|:|||.||||||
Human   979 ---------GVS---------VTSSN-----TGVPDISGSVYSKTQ------QSFEKQGFHSGTP 1014

  Fly  1190 -PPFNMPNTQTAGG-----TSAQPYGMYLPMP--------AAGHHNMIHQPIHQD---------- 1230
             ..||:|:...:||     |:|    .|.|.|        ...|..::|..:.||          
Human  1015 AASFNLPSALGSGGPINPATAA----AYPPAPFMHILTPHQQPHSQILHHHLQQDGQLPYLQMIL 1075

  Fly  1231 --------SNSAGQRQQSTS--QSKSAGKQGYSPSYWAGQN 1261
                    ...:|||.|::|  |.....|..|:...| |.|
Human  1076 CCQRQQEEQTGSGQRSQTSSIPQKPQTNKSAYNSYSW-GAN 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ligNP_001260795.1 UBA_UBP2_like 85..122 CDD:270463 12/36 (33%)
CAF-1_p60_C 498..589 CDD:292150 21/90 (23%)
DUF3697 575..607 CDD:289261 18/31 (58%)
UBAP2LNP_001362541.1 UBA_UBP2_like 50..87 CDD:270463 12/36 (33%)
DUF3697 507..534 CDD:372135 18/29 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159629
Domainoid 1 1.000 144 1.000 Domainoid score I4615
eggNOG 1 0.900 - - E1_2C0H4
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I4349
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47464
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003488
OrthoInspector 1 1.000 - - otm40356
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16308
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2380
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.950

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