DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lig and lig

DIOPT Version :10

Sequence 1:NP_001260795.1 Gene:lig / 35771 FlyBaseID:FBgn0020279 Length:1417 Species:Drosophila melanogaster
Sequence 2:XP_061504039.1 Gene:lig / 1278410 VectorBaseID:AGAMI1_010795 Length:1456 Species:Anopheles gambiae


Alignment Length:1614 Identity:611/1614 - (37%)
Similarity:761/1614 - (47%) Gaps:511/1614 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTQTRSGGGGGGGHARNQKK-----------------------------SNASNS--------- 27
            |||||||||||||| .||:.|                             :|||.:         
Mosquito     1 MSTQTRSGGGGGGG-GRNKSKAKHHENKENLAKEDGQNQSQQYPKGGSGPNNASGNDGSAATTGS 64

  Fly    28 -GGG---------GTGHHDGVSHAA---------------------AAG----KKGGQ------- 50
             |||         |:|.|.|..:||                     |||    |.||.       
Mosquito    65 VGGGRGGDHQKQKGSGGHKGTDNAAPKVVDVKEKQQREAGGGSGGGAAGGNNEKSGGSTGAASGA 129

  Fly    51 ---DASKTDKPEKA-QPKATTEQLRIAQITN--STTEDPQINEKVLLLLTMTQRSEEEVCCALNE 109
               .||.|....|| ||  |.||:||||||:  |..:||:|.||:..|:..||||||||||||.|
Mosquito   130 GAGGASATHTVVKAKQP--TAEQIRIAQITDIKSGMDDPKIQEKIQSLMETTQRSEEEVCCALQE 192

  Fly   110 CDYDLEAAANFLIEELPQGAFAKYEKKRKNKA-ANNTADGAAGDGDWAD-------------GNG 160
            ||.||:.|..||:|.||.||||...||:|:|: |....||..| |||..             |..
Mosquito   193 CDSDLDRAVIFLLETLPVGAFATTSKKKKSKSQAAAQKDGEDG-GDWETTGPTTVGGASVQLGGI 256

  Fly   161 NADRREKSRNRSSNRGGTRGSSDSRGWRGRETRENERNQRESREPWSGQNAG--QDRGDDRANDN 223
            |.|.:|:.|     |||.||.|.              ||| |..|..|..||  :|.|.||..|.
Mosquito   257 NVDLKEQQR-----RGGNRGGSG--------------NQR-SGGPGRGGRAGGYRDGGGDRDRDR 301

  Fly   224 YRGQRNGGGRSGPGGGGRGGGFVSRSGRGGGRMGGRTGGPRGDRGSGGPG-GAYGS--GRGGN-- 283
               .|||..:     ||.|||:.:|:|..||||.|...||      |||| |.|||  ||||.  
Mosquito   302 ---DRNGYDK-----GGEGGGYRNRAGGDGGRMRGGRDGP------GGPGRGNYGSRGGRGGGPR 352

  Fly   284 -----------------ANEDHHEVELWDN-TIAQNAE----KQQQAHDDAWGDWNNEEYEGSLK 326
                             .|.||.|::.||. |...||.    :...|..|.||||:||||.|:|.
Mosquito   353 LGTRGPGSRDQNRGSRMMNNDHQEIDSWDPVTTPANANDLKPEDCTAFTDTWGDWDNEEYTGTLA 417

  Fly   327 DSKVFTTSNLATQSAANVVSGTGA--------SVTAVPAAAG--TEISAPPGLEHQLVQQGSHLE 381
            |:|.:..:..:|.:.:   :|.||        :.|.||.||.  ||::||||||.|         
Mosquito   418 DTKGYAGAVASTTAPS---AGAGAQQQQSQQSTQTGVPPAASNVTELAAPPGLEQQ--------- 470

  Fly   382 ESSSSGPAAVTPPATLSGSATTPLLQYSAAVSNPPPQ-----LQSQGTQSGAGTGASAAAGGGAG 441
                                          |.||||.     :|...|...:.|..:|.|.|||.
Mosquito   471 ------------------------------VLNPPPPKDTELVQQYSTTVVSSTATAAVAAGGAT 505

  Fly   442 STPSSFVSASPDTFSSAASAAATLVHQAQKQQQLQQQTTPIKPSATLSVEQSQYFNSLASQGVSP 506
            .. :|.|....|..:...:|.....|..|....     .|:..|::||.||||||::|:||  :.
Mosquito   506 GV-ASVVPQYSDLHAGTPNATTAAQHLRQALDM-----PPMNTSSSLSAEQSQYFSTLSSQ--NS 562

  Fly   507 GSVPVQSAPAGYAQNPVAAY--SQTSTSV-------------GVSQYPNTY----ANVFASGTAA 552
            ...|..|| .|:.|.|.|..  ||..|:|             ...|||..:    ::..|:..||
Mosquito   563 NLQPTPSA-VGFQQQPPAGVVASQPPTTVVPAVQQQQQPPQPNSVQYPTAFVGATSDATAAAAAA 626

  Fly   553 GAGT--AEQSQQQPQIRRARVKLPPPSKIPASAVEMPGDNALNNIGYLDVQFGALDFGTDDGFEP 615
            ||.|  |..:.|||.:||.|.::|||||||:||||||||| :|||||||||||.||||.||.|:.
Mosquito   627 GAPTSYAAAATQQPPVRRQRARVPPPSKIPSSAVEMPGDN-MNNIGYLDVQFGGLDFGADDSFDA 690

  Fly   616 -LPEKVGSGFSIDG----------------------------------QQQQQ-----------Q 634
             :.:|..|.....|                                  |||||           |
Mosquito   691 VVSDKFNSTTGTAGSSVMDSTPSTVQTSVVSQATQAVGQPQASQTQTVQQQQQGAQVPPATVGVQ 755

  Fly   635 PDDYQSKSQQQQQVTL------------------------------------------AAGLQSS 657
            |...||:.|||||..:                                          |.||.||
Mosquito   756 PPAAQSQLQQQQQQVVSQAPQQTVQPDVNDYQSKVGGGVVAGSVVPNNLQPKSSNLPGAPGLASS 820

  Fly   658 QI-------------SDAL-------NAAGYTSRSTSQQQQGVSSAVN--ATIDQLTKSDPYGQT 700
            ||             :|.|       ||:|..|.|.|   .||:|..|  |.:|||||||||||:
Mosquito   821 QIMPGQGTTEALSSQNDGLANSYSRTNASGSVSTSVS---AGVNSMSNAAAALDQLTKSDPYGQS 882

  Fly   701 GGSGNA----YQNA-YQSSGASKTASGFPTTAPGGYSSSTYANVQSSVA--------NSYQQQGY 752
            ..:..|    |||| |.|:.|:||||..||.||.||::.:|:|.|.:.|        :||.|...
Mosquito   883 ASTNTALTGGYQNAPYSSTQANKTASYPPTGAPQGYNNMSYSNNQVTNAYPPSTNNYSSYNQGNV 947

  Fly   753 GSYQPSSYQQQAGSGAQSGTGAVSGG----------------------GGTATQNIPVGGSSS-- 793
            .:|||.|..........:.||...||                      ||..:...||..:||  
Mosquito   948 NAYQPPSSSVTNNVVPNNNTGNSVGGVSNQSNLPVNNNAVNSSSNNNAGGYLSSQYPVSQTSSAF 1012

  Fly   794 ------QNST-SVSTSSGVSSNSGSTGNGGVVSGQTGANQAAVSNNNSVSGSSSVSNVTAGVASG 851
                  |||: :|..::|::||:|.:|:....|||.|:|    .:::.:..:..||.....|||.
Mosquito  1013 PSQQNYQNSSQNVYGNTGLNSNTGYSGSTNTTSGQYGSN----FSSSKLKDTPVVSTPFESVASS 1073

  Fly   852 NVAGVGGGVSQSGVSSGVGVPGGSASSVGVNVNNNSSSASSVGAATVAQTATGTTAAVLASLTNK 916
            .|                     |.||.. |.|||.:|:||:..::|..|.:..|     .|.||
Mosquito  1074 TV---------------------SNSSTN-NSNNNVTSSSSLPISSVVSTTSKYT-----YLANK 1111

  Fly   917 NTSSSN---------------SSGSGGSAATTTGNASGQGAGASTGGVGSSSGAGGAGSGGGSGS 966
            ...:.|               ...:..|::||:|.:                             
Mosquito  1112 TVETRNLLLHNVFVLLLLCIILYFAAKSSSTTSGTS----------------------------- 1147

  Fly   967 GLVPTNIQMVSQYIQT-GLPYYQQ-PVYSYEELQMMQQRVPHVQGYYDLNY-PPASLGAG--RD- 1025
              |.||:.||:.|||. |||:||| .|||||:||:||||:|||.|:||:|| .|.||||.  || 
Mosquito  1148 --VVTNLPMVNPYIQAPGLPFYQQAAVYSYEDLQLMQQRMPHVPGFYDINYQTPTSLGAAGVRDA 1210

  Fly  1026 NLGSVTYSAMNDGRFARTDNNSSPVGNVSSTMSQQAGSSAPMLNVPYAYFYGGNVMPGS-FQYGT 1089
            |||||.||.|:||||.|||||||||.||.|::|||.||..||||:|||||||||:||.| |||||
Mosquito  1211 NLGSVAYSTMSDGRFTRTDNNSSPVSNVPSSLSQQTGSGGPMLNLPYAYFYGGNMMPASGFQYGT 1275

  Fly  1090 PAIYP-QIPAANTASGQQFPKPSY-SAGYGS-TSYDTLSQTTQDYSKGGYSSSV--NQQSKTQTV 1149
            | :|| |:|.....||.||.||:| :.|||| |.||||.|:.|||:|..|.:|:  .||||.|||
Mosquito  1276 P-VYPQQMPTNAATSGGQFQKPAYNTGGYGSATGYDTLGQSGQDYNKNAYQASIVGQQQSKGQTV 1339

  Fly  1150 SN-QSQAGTGSDLTSSMYGKGHVALNKVNSYEKQSFHSGTPPPFNMPNTQTAGGTSAQPYGM--- 1210
            :| ||.:|:|||:..|||||.|||:|||| |:|||||||||||:|:..|||||.|||||||.   
Mosquito  1340 ANQQSGSGSGSDMAPSMYGKNHVAINKVN-YDKQSFHSGTPPPYNIAGTQTAGTTSAQPYGQHLA 1403

  Fly  1211 YLPMPAAGHHNM-IHQPIHQDSNSAGQRQQSTSQSKSAGK-QGYSPS-YWAGQN 1261
            |:|..|. |||: :||.:||||||:|||.|:.:|.|:|.| ||||.| ||.|.|
Mosquito  1404 YIPTMAT-HHNINMHQNMHQDSNSSGQRPQNNNQGKTASKQQGYSASTYWTGPN 1456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ligNP_001260795.1 PRK12678 16..>229 CDD:237171 106/314 (34%)
UBA_UBP2_like 85..122 CDD:270463 23/36 (64%)
DUF3697 575..607 CDD:372135 27/31 (87%)
ligXP_061504039.1 None

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