DRSC/TRiP Functional Genomics Resources

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Protein Alignment lig and ubap2

DIOPT Version :10

Sequence 1:NP_001260795.1 Gene:lig / 35771 FlyBaseID:FBgn0020279 Length:1417 Species:Drosophila melanogaster
Sequence 2:XP_004910371.2 Gene:ubap2 / 100379870 XenbaseID:XB-GENE-5921250 Length:1131 Species:Xenopus tropicalis


Alignment Length:1363 Identity:367/1363 - (26%)
Similarity:534/1363 - (39%) Gaps:409/1363 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DKPEKAQP--------KATTEQLRIAQITNSTTEDPQINEKVLLLLTMTQRSEEEVCCALNECDY 112
            :||:.:.|        :||.||:|:||:... ..|.:..:||..|:.:|.::::|...||::|:.
 Frog    15 EKPQISAPQTQTQKQVQATAEQIRLAQMIYD-KNDAEFEDKVKQLMEVTGKNQDECIVALHDCNG 78

  Fly   113 DLEAAANFLIEELPQGAFAKYEKKRKNKAANNTADGAAGDGDWADGNG-----------NADRRE 166
            |:..|.|.|:|                        |.:....|....|           |.:.||
 Frog    79 DVNRAINILLE------------------------GNSDTTSWETVGGKKKSIGKESSENKENRE 119

  Fly   167 KSRNRSSNRGGTRGSSDSR---GWRGRETRENERNQRESREPWSGQNAGQDRG-DDRANDNYRGQ 227
            :..:|..:||  ||||..|   |.||||.|..|.              |.|.| .||.:|  ||:
 Frog   120 RRGDREMSRG--RGSSSRRGRGGSRGREFRAEEN--------------GVDIGPGDRPSD--RGR 166

  Fly   228 RNGGGRSGPGGGGRGGGFVSRSGRGGGRMGGRTGGPRGDRGSGGPGGAYGSGRGGNANEDHHEVE 292
            |   || |.|.||||      .|||.||...:..|.........|          .||:...:.:
 Frog   167 R---GR-GRGFGGRG------RGRGSGRFSAQGMGTFNPADYTEP----------TANDGVAKTD 211

  Fly   293 LWDNTIAQNAEKQQQAHDD---------------AW----GDWNNEEYEGSLKDSKVFTTSNLAT 338
            :|        |..|...||               ||    .:|..|::...|.::||||.|::.|
 Frog   212 VW--------ETGQSDCDDGTEISGSPFLPPLKGAWRSSLEEWTTEDWNEDLSETKVFTASSVPT 268

  Fly   339 QSAANVVSGTGASVTAV--PAAAGTEISAPPGLEHQLVQQGSHLEESSSSGPAAVTPPATLSGSA 401
            ::  ::..|....:.|:  ...:|||..:......|....|..|..::|...:.:||.||.:.:|
 Frog   269 EN--HITPGQSIDLVALLQKQPSGTETDSVTFEASQQQNYGQALVFTNSQHSSQITPVATTTSNA 331

  Fly   402 TTPLLQY-----------------SAAVSNPP-----PQLQSQG---------TQSGAGTGASAA 435
            ..   .|                 |:.::|.|     .||:|.|         .||..||.||.:
 Frog   332 VN---SYSPQSLSSVLGSGFGELGSSKLTNSPGSQILEQLKSPGLGQFTNQTPQQSSTGTAASTS 393

  Fly   436 -----AGGGAGSTPSSFVSASPDTFSSAASAAATLVHQAQKQQQLQQQTTPIKPSATLSVEQSQY 495
                 .|      |.|.|....| |.|....:..|....|:    |.|..|:.|..         
 Frog   394 WDIKPTG------PQSSVLGQFD-FKSQPEPSPVLSQLTQR----QHQAVPVPPPG--------- 438

  Fly   496 FNSLASQGVSPGSVPVQSAPAGYAQNPVAAYSQTSTSVGVSQYPNTYANVFASGTAAGAGTAEQS 560
            ..|..||.....:.||.|:.|......::..|..:.::                      :|:|:
 Frog   439 LESFTSQVKLRETSPVDSSSAVSKMLQLSNLSLDTQTI----------------------SAQQT 481

  Fly   561 QQQPQIRRARVKLPPPSK-----IPASAVEMPGDNALNNIGYLDVQFGALDFGTDDGFEPLPEKV 620
            |||.|::..:.::||.||     ||||||||||.   .::..|:||||||:||:    ||...:.
 Frog   482 QQQKQLKPQKRRIPPTSKVGIQEIPASAVEMPGS---ADVSGLNVQFGALEFGS----EPSLAEF 539

  Fly   621 GSGFSIDGQQQQQQPDDYQSKSQQQQQVTLAAGLQSS-QISDALNAAGYT-------SRSTSQQQ 677
            ||..|.|  ...|.|.:..||       |::..|.:. .||.|:....||       |.|:|.|.
 Frog   540 GSNSSPD--TATQTPSNLYSK-------TISDSLNTPLPISSAVQEPSYTPTVIATSSLSSSSQS 595

  Fly   678 QGVSSAVNATIDQLTKSDPYGQTGGSGNAYQNAYQSSGASKTASGFPTTAPGGYSSSTYANVQSS 742
               :|.|.||   .:.|..|.||......   |||||  ...|...|.|  .|::........||
 Frog   596 ---TSPVTAT---SSSSSSYDQTSVHSRV---AYQSS--MPPAEVVPVT--NGHNGIRAQTTLSS 647

  Fly   743 VANSYQQQGYGSYQPSSYQQQAGSGAQSGTGAVSGGGGTATQNIPVGGSSSQNSTSVSTS----- 802
            ..         |.||  .:.::...:.|..|::.....|.:..:|   |:.|:|::||.|     
 Frog   648 TP---------SVQP--VKPESSPPSLSSVGSLPSTVPTTSSLLP---SAPQHSSAVSLSSLPQP 698

  Fly   803 SGVSSNSGSTGNGGVVSGQTGANQAAVSNNNSVSGSSSVSNVTAGVASGNVAGVGGGVSQSGVSS 867
            |.:||...|..| ..:||          :.||:..:|.:|:                        
 Frog   699 SDLSSTPLSQLN-STLSG----------HQNSLPAASVLSS------------------------ 728

  Fly   868 GVGVPGGSASSVGVNVNNNSSSASSVGAATVAQTATGTTAAVLASLTNKNTSSSNSSGSGGSAAT 932
                   :||....:|.:..|...|...:|.:.:||.||:||::..:..|  |.|:.|      .
 Frog   729 -------TASHSHTSVESTVSLQPSATFSTASTSATSTTSAVVSMASTMN--SINTLG------L 778

  Fly   933 TTGNASGQGAGASTGGVGSSSGAGGAGSGGGSGSGLVPTNIQ------MVSQYIQTG----LPYY 987
            |..:.|...|...|..:.:              ||..|.|:.      :.:||| .|    ||.|
 Frog   779 TAPSISMPAATTRTAPLVT--------------SGKAPPNLPQGVPPLLHNQYI-VGPGGLLPAY 828

  Fly   988 QQPVYSYEELQMMQQRVPHVQGYYDLNYP-PASLGAGRD-NLGSVTYSAMNDGRFARTDNNS-SP 1049
            .| :|.|::|||:|.|:|  ..||.:.:| ||:| .||| .|.|..||. :..:|.|.|:.| :|
 Frog   829 PQ-IYGYDDLQMLQSRLP--MDYYGITFPAPATL-TGRDGGLASNPYSG-DVAKFGRADSASPAP 888

  Fly  1050 VGNVSSTMSQQA----GSSAPMLN--VPYAYFYGG-------NVMPGSFQYGTPAIYPQIPAANT 1101
            ...::.....|.    .:..|.||  :|..|.|.|       ..:|.:||||.....|  ||:..
 Frog   889 ATTLAQPQQNQTQTHHTAQQPFLNPTLPPGYSYTGLPYYAGVPGVPSAFQYGPTMFVP--PASAK 951

  Fly  1102 ASGQQFPKPS----YSAGYGSTS----YDTLSQTT--QDYSKGGYSSSVNQQSKTQTVSNQSQAG 1156
            ..|......|    .:.|||..|    ||.|:|.|  .||||||||.|...|||:        ||
 Frog   952 QHGVNLSTASTPFQQAGGYGQHSYGAGYDDLTQGTAAADYSKGGYSGSSQAQSKS--------AG 1008

  Fly  1157 TG--------------SDLTSSMYGKGHVALNKVNSYEKQSFHSGTPPPFNMP---------NTQ 1198
            ||              .|::.|:|       ||..:::||.||:.|||||::|         |..
 Frog  1009 TGPGKGVSVSSSNTGVPDISGSVY-------NKTQTFDKQGFHAATPPPFSLPSALGSTGPLNPG 1066

  Fly  1199 TAGGTSAQPYGMYLPMPAAGHHNMIHQPIHQD--SNSAGQRQQSTSQSKS-AGKQGYSPS-YW 1257
            .|.|.:..|:...||.....|..::|..:.||  ..||.:.|.:..|.|| |.|..|:.| ||
 Frog  1067 AAAGYAPAPFLHILPAHQQPHSQLLHHHLQQDGQGGSAQRTQPNAMQQKSQANKTAYASSPYW 1129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ligNP_001260795.1 PRK12678 16..>229 CDD:237171 53/195 (27%)
UBA_UBP2_like 85..122 CDD:270463 11/36 (31%)
DUF3697 575..607 CDD:372135 20/36 (56%)
ubap2XP_004910371.2 UBA_UBP2_like 51..88 CDD:270463 11/36 (31%)
DUF3697 496..530 CDD:372135 20/36 (56%)

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