DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12769 and Zfp423

DIOPT Version :10

Sequence 1:NP_001286181.1 Gene:CG12769 / 35770 FlyBaseID:FBgn0033252 Length:713 Species:Drosophila melanogaster
Sequence 2:XP_063134398.1 Gene:Zfp423 / 94188 RGDID:621664 Length:1316 Species:Rattus norvegicus


Alignment Length:855 Identity:156/855 - (18%)
Similarity:262/855 - (30%) Gaps:280/855 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RSLKDAASSASESELQEPRSPTPTPTNLSTGPHSPPMTFRCERC-DSFETSSRASLLLHVVQCLA 110
            |:|:|..|..|:.|..|........:           .:.|:.| ..||  |.|.|..|......
  Rat    48 RALEDRNSVTSQEERNEDDEDVEDES-----------IYTCDHCQQDFE--SLADLTDHRAHRCP 99

  Fly   111 GQAAAAAAAAAASARLKSEDLQEPENM-------SLGHMEGGKG---DGQTGNGSSSSASSSPAG 165
            |........:..::...|:|:..|..|       .||..|||.|   ..|..:.|....|.....
  Rat   100 GDGDDDPQLSWVASSPSSKDVASPTQMIGDGCDLGLGEEEGGTGLPYPCQFCDKSFIRLSYLKRH 164

  Fly   166 NSGGGGGGNSSSRKVFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTT 230
            ..      ..|.:..|:|..|:..|.:..:..||...|||.|.|.|..|:..|.|.|||..|..|
  Rat   165 EQ------IHSDKLPFKCTFCSRLFKHKRSRDRHIKLHTGDKKYHCHECEAAFSRSDHLKIHLKT 223

  Fly   231 HTKTLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLVKT-------------------------- 269
            |:.:.|:.|.:|.|||....::::|.|.....:..|.|:                          
  Rat   224 HSSSKPFKCSVCKRGFSSTSSLQSHMQAHKKNKEHLAKSEKEAKKDDFMCDYCEDTFSQTEELEK 288

  Fly   270 --------------------------------------------CPLCSYRAGSMKSLRIHFFNR 290
                                                        ||:|..:..|::.:..|..:.
  Rat   289 HVLTLHPQLSEKADLQCIHCPEVFVDESTLLAHIHQAHANQKHKCPMCPEQFSSVEGVYCHLDSH 353

  Fly   291 HGIDLDN----PGPGGTSSLLLALESQASAAAAAAAASYVPPGLSP----VPVQSQSQQQQQQQV 347
            ...|..|    |.|     :|.::.|.:||...::|:  |..|.:|    .|::.|.:.:     
  Rat   354 RQPDSSNHSVSPDP-----VLGSVASMSSATPDSSAS--VERGSTPDSTLKPLRGQKKMR----- 406

  Fly   348 APPASDSGESMRSLENATP-------------PMHFLTPHVE----------------------- 376
                 |.|:|...:..:.|             .:|..|.|.:                       
  Rat   407 -----DDGQSWSKVVYSCPYCSKRDFTSLAVLEIHLKTIHADKPQQSHTCQICLDSMPTLYNLNE 466

  Fly   377 -ISTLGES--------GNTELFNLICVWRESALQGNNNNNNN---NNCATNNNNNINGASNNCNS 429
             :..|.:|        ||...|:  |.:........|:...:   ::|..|.|......:..||.
  Rat   467 HVRKLHKSHAYPVMQFGNISAFH--CNYCPEMFADINSLQEHIRVSHCGPNANPPDGNNAFFCNQ 529

  Fly   430 ISNG------------NAESNGDKVKDRALIMQSPVELPMD----------CNTKATPITSSTTA 472
            .|.|            .|..:....|     ::|||..|..          |..  :||..|.. 
  Rat   530 CSMGFLTESSLTEHIQQAHCSVGSTK-----LESPVIQPTQSFMEVYSCPYCTN--SPIFGSIL- 586

  Fly   473 SSLSGGLKSHHQH-PHHHHHHHHHHENHITPSISLIPIKQEPMSEDMDKKDLMNGSDPSSDTEQA 536
             .|:..:|.:|:: |..|.......::.::..:.:...|::.:|...:  .:.||..|.:..:..
  Rat   587 -KLTKHIKENHKNIPLAHSKKSKAEQSPVSSDVEVSSPKRQRLSGSAN--SISNGEYPCNQCDLK 648

  Fly   537 SNNNNSSSNNNRITSLIKVSPLKSLLREDLKRRICAKANNRITRNATPLESNNNNSVLSNSLSNG 601
            .:|..|...:           ||..|...|:::.|.:...         :.::..|:|.:...:.
  Rat   649 FSNFESFQTH-----------LKLHLELLLRKQACPQCKE---------DFDSQESLLQHLTVHY 693

  Fly   602 SGRGSPGVNGGSGGGGGGGPPTPAT----PSATNGASSTP-------------ICNGTITSTGQD 649
            .                    |.:|    .|.....||..             :.:.|:.....|
  Rat   694 M--------------------TTSTHYVCESCDKQFSSVDDLQKHLLDMHTFVLYHCTLCQEVFD 738

  Fly   650 GDLLI---------NRKLILTCHFCGIEFPDETLYFLH-KGCHCESNP---WRCNICGEQLNNVY 701
            ..:.|         |.|.:..|..|..:|..|....:| |..|. .||   .:|..|||..:...
  Rat   739 SKVSIQVHLAVKHSNEKKMYRCTACNWDFRKEADLQVHVKHSHL-GNPAKAHKCIFCGETFSTEV 802

  Fly   702 EFNSHLLSKS 711
            |...|:.:.|
  Rat   803 ELQCHITTHS 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12769NP_001286181.1 C2H2 Zn finger 183..203 CDD:275368 5/19 (26%)
zf-H2C2_2 195..218 CDD:463886 9/22 (41%)
C2H2 Zn finger 211..231 CDD:275368 8/19 (42%)
C2H2 Zn finger 239..255 CDD:275368 5/15 (33%)
C2H2 Zn finger 662..689 CDD:275371 9/30 (30%)
C2H2 Zn finger 690..712 CDD:275371 7/22 (32%)
Zfp423XP_063134398.1 None

Return to query results.
Submit another query.