DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12769 and ikzf1

DIOPT Version :10

Sequence 1:NP_001286181.1 Gene:CG12769 / 35770 FlyBaseID:FBgn0033252 Length:713 Species:Drosophila melanogaster
Sequence 2:XP_012820091.2 Gene:ikzf1 / 548415 XenbaseID:XB-GENE-876522 Length:568 Species:Xenopus tropicalis


Alignment Length:712 Identity:150/712 - (21%)
Similarity:241/712 - (33%) Gaps:247/712 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 AMALRSLKDAASSASESELQEPRSPTPTPTNLSTGPHSPPMTFRCERCDSFETSSRASLLLHVVQ 107
            |..:..:....|.|....|.:|..|.|.|.:|||...|             :.:|:..      :
 Frog    59 AQDITQMSGNQSPAMSDGLDDPDEPMPVPEDLSTNAAS-------------QQNSKNE------K 104

  Fly   108 CLAGQAAAAAAAAAASARLKSEDLQEPENMSLGHMEGGK---------GDGQTGNGSSSSASSSP 163
            .:||             .:|.|:..:.||.....|.|.:         ..|:..|||.:...:..
 Frog   105 SIAG-------------NIKMENQSDEENGRACEMNGEECAEDLRMLDSAGEKINGSLNGQGTKA 156

  Fly   164 AGNSGGGGGGNSSSRKVFECDVCNMKFSNGAN-MRRHKMRHTGVKPYECRVCQKRFFRKDHLAEH 227
            .    .|.||........:||:|.: ...|.| :..||..|||.:|::|..|...|.:|.:|..|
 Frog   157 L----TGVGGIRLPNGKLKCDICGI-ICIGPNVLMVHKRSHTGERPFQCNQCGASFTQKGNLLRH 216

  Fly   228 FTTHTKTLPYHCPICNRGFQRQIAMRAHFQNEHVGQ-HDLVKTCPLC--SYRAGSMKSLRIHFFN 289
            ...|:...|:.|.:||...:|:.|:..|.:...||: |    .|..|  ||:..|  ||..|...
 Frog   217 IKLHSGEKPFKCHMCNYACRRRDALTGHLRTHSVGKPH----KCGYCGRSYKQRS--SLEEHKER 275

  Fly   290 RHGIDLDNPGPGGTSSLLLALESQASAAAAAAAASYVPPGLSPVPVQSQSQQQQQQQVAPPASDS 354
            .|.. |.:.|          |:|...|.                     .::..|..:|...|..
 Frog   276 CHNY-LQSMG----------LQSHLYAV---------------------KEESNQNDMAEDLSKI 308

  Fly   355 GESMRSL-----------ENATPPMHFLTPHVEISTLGESGNTELFNLICVWRESALQGNNNNNN 408
            | |.|||           ..:..|..|         :||.            |.|.:..::|.|.
 Frog   309 G-SERSLVLDRLASNVAKRKSCMPQKF---------VGEK------------RLSDIPYDHNANY 351

  Fly   409 NNNCATNNNNNINGASNNCNSISNGNAESNGDKVKDRALIMQSPVELPMDCNTKATPITSSTTAS 473
            .........:.::.|.|  |:|:...|||.      |.|:...|      ..::..||.|     
 Frog   352 EKENEMMQTHVMDQAIN--NAITYLGAESL------RPLVQTPP------GGSEGVPINS----- 397

  Fly   474 SLSGGLKSHHQHPHHHHHHHHHHENHITPSISLIPIKQEPMSEDMDKKDLMNGSDPSSDTEQASN 538
                 :.:.|: ||                                       :|.:::|.|   
 Frog   398 -----MYALHK-PH---------------------------------------ADITTNTSQ--- 414

  Fly   539 NNNSSSNNNRITSLIKVSPLKSLLREDLKRRICAKANNRITRNATPLESNNNNS----VLSNSLS 599
                |::.:.:.:|:.:|.:||:..|    |..:.:|:  .:::|..||||...    .|:|.: 
 Frog   415 ----SAHESAVENLLLLSQVKSISSE----REVSPSNS--CQDSTDTESNNEERGGLIYLTNHM- 468

  Fly   600 NGSGRGSPGVNGGSGGGGGGGPPTPATPSATNG-------------ASSTPICNGTITSTGQDGD 651
                                      ||...||             |||....:.....:|....
 Frog   469 --------------------------TPHPRNGLSTKEHRPFEMVRASSDNSQDAFKVVSGSGES 507

  Fly   652 LLINRKLILTCHFCGIEFPDETLYFLHKGCHCESNPWRCNICGEQLNNVYEFNSHLLSKSHQ 713
            |.:::     |..|.:.|.|..:|.:|.|||...:|:.||:||.|..:.|||:||:....|:
 Frog   508 LKVHK-----CEHCRVIFLDHVMYTIHMGCHGFRDPFECNMCGYQSQDRYEFSSHITRGEHR 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12769NP_001286181.1 C2H2 Zn finger 183..203 CDD:275368 7/20 (35%)
zf-H2C2_2 195..218 CDD:463886 9/23 (39%)
C2H2 Zn finger 211..231 CDD:275368 6/19 (32%)
C2H2 Zn finger 239..255 CDD:275368 5/15 (33%)
C2H2 Zn finger 662..689 CDD:275371 10/26 (38%)
C2H2 Zn finger 690..712 CDD:275371 10/21 (48%)
ikzf1XP_012820091.2 C2H2 Zn finger 172..192 CDD:275368 7/20 (35%)
zf-H2C2_2 185..209 CDD:463886 9/23 (39%)
COG5048 196..>544 CDD:227381 103/516 (20%)
C2H2 Zn finger 200..220 CDD:275368 6/19 (32%)
zf-H2C2_2 212..237 CDD:463886 7/24 (29%)
C2H2 Zn finger 228..248 CDD:275368 6/19 (32%)
C2H2 Zn finger 256..277 CDD:275368 8/22 (36%)

Return to query results.
Submit another query.