DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12769 and hb

DIOPT Version :10

Sequence 1:NP_001286181.1 Gene:CG12769 / 35770 FlyBaseID:FBgn0033252 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster


Alignment Length:731 Identity:152/731 - (20%)
Similarity:236/731 - (32%) Gaps:207/731 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 SPTPTPTNLSTGPHSPPMTFRCERCDSFETSSRASLLLHVVQCLAGQAAAAAAAAAASARLKS-- 128
            ||.||||:.||                                    .|..|.|..:|.:|::  
  Fly   150 SPQPTPTSAST------------------------------------IAPVAVATGSSEKLQALT 178

  Fly   129 --EDL---QEPENMSLGHMEGGKGDGQTGNGSSS---SASSS--------PAGNSGGGGGGNSSS 177
              .|:   :.|...|..::|..|...|..|.|..   .|.|.        |..||.|       .
  Fly   179 PPMDVTPPKSPAKSSQSNIEPEKEHDQMSNSSEDMKYMAESEDDDTNIRMPIYNSHG-------K 236

  Fly   178 RKVFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFF---RKDHLAEHFTTHTKTLPYHC 239
            .|.::|..|.:......:...|...|  :||.:...|.|..|   .|.||..|...|....|:.|
  Fly   237 MKNYKCKTCGVVAITKVDFWAHTRTH--MKPDKILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQC 299

  Fly   240 PICNRGFQRQIAMRAHFQNEHVGQHDLV--KTCPLCSYRAGSMKSLRIH---FFNRHGIDLD--- 296
            ..|:     ...:.....|.|...|..|  ..|..|.|......|.::|   :.::.|:.||   
  Fly   300 DKCS-----YTCVNKSMLNSHRKSHSSVYQYRCADCDYATKYCHSFKLHLRKYGHKPGMVLDEDG 359

  Fly   297 --------------------NPGP---GGTSS-------LLLALESQASAAAAAAAASYVPPGLS 331
                                |.||   ||:.|       ..:|.:.|.|..|...|.|.:...|.
  Fly   360 TPNPSLVIDVYGTRRGPKSKNGGPIASGGSGSGSRKSNVAAVAPQQQQSQPAQPVATSQLSAALQ 424

  Fly   332 PVP-VQSQSQQQQQQQVAPPASDSGESMRSLENATP----PMHFLTPHVEISTLGESGNTELF-- 389
            ..| ||..|.......|.|..:...:|:.|:|. ||    |.:.|.|..  |.|.::.|...|  
  Fly   425 GFPLVQGNSAPPAASPVLPLPASPAKSVASVEQ-TPSLPSPANLLPPLA--SLLQQNRNMAFFPY 486

  Fly   390 -----NLICVWRESA------------LQGNNNNNNNNNCATNNNNNINGASNNCNSISNGNAES 437
                 .::...:::|            ||..|...::|.....::.....:.::...:|.|....
  Fly   487 WNLNLQMLAAQQQAAVLAQLSPRMREQLQQQNQQQSDNEEEEQDDEYERKSVDSAMDLSQGTPVK 551

  Fly   438 NGDKVKDRALIMQSPVELPMDCNTKATPITSSTTASSLSGGLKSHHQHPHHHHHHHHHHENHITP 502
            ..::.:.    .|.|:.:.:....:|||:.||:.||...|                     .:..
  Fly   552 EDEQQQQ----PQQPLAMNLKVEEEATPLMSSSNASRRKG---------------------RVLK 591

  Fly   503 SISLIPIKQEPMSEDMDKKDLMNGSDPSSDTEQASNNNNSSSNNNRITSLIKVSPLKSLLREDLK 567
            ..:|:.::.|.|:.....|      .||:....||                  ||:..  |:.:.
  Fly   592 LDTLLQLRSEAMTSPEQLK------VPSTPMPTAS------------------SPIAG--RKPMP 630

  Fly   568 RRICAKANNRITRNATPLESNNNNSVLSNSLSNG-SGRGSPGVNGGSGGGGGGGPPTPATPSATN 631
            ...|:..::......|......|.|..|.:.|:| |...|...||.|.........|.|..:..:
  Fly   631 EEHCSGTSSADESMETAHVPQANTSASSTASSSGNSSNASSNSNGNSSSNSSSNGTTSAVAAPPS 695

  Fly   632 GASSTPICNGTITSTGQDGDLLINRKLILTCHFCGIEFPDETLYFLHKGCHCESNPWRCNICGEQ 696
            |   ||...|.                |..|.:|.|.|.|..||.:|.|.|...:.::||:|||:
  Fly   696 G---TPAAAGA----------------IYECKYCDIFFKDAVLYTIHMGYHSCDDVFKCNMCGEK 741

  Fly   697 LNNVYEFNSHLLSKSH 712
            .:.......|:...:|
  Fly   742 CDGPVGLFVHMARNAH 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12769NP_001286181.1 C2H2 Zn finger 183..203 CDD:275368 3/19 (16%)
zf-H2C2_2 195..218 CDD:463886 6/22 (27%)
C2H2 Zn finger 211..231 CDD:275368 7/22 (32%)
C2H2 Zn finger 239..255 CDD:275368 2/15 (13%)
C2H2 Zn finger 662..689 CDD:275371 10/26 (38%)
C2H2 Zn finger 690..712 CDD:275371 6/21 (29%)
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 3/19 (16%)
C2H2 Zn finger 271..291 CDD:275368 7/19 (37%)
zf-H2C2_2 283..308 CDD:463886 7/29 (24%)
C2H2 Zn finger 299..319 CDD:275368 4/24 (17%)
C2H2 Zn finger 327..345 CDD:275368 5/17 (29%)
C2H2 Zn finger 707..727 CDD:275371 9/19 (47%)
C2H2 Zn finger 735..757 CDD:275371 6/21 (29%)

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