DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12769 and Zfp462

DIOPT Version :9

Sequence 1:NP_001286181.1 Gene:CG12769 / 35770 FlyBaseID:FBgn0033252 Length:713 Species:Drosophila melanogaster
Sequence 2:XP_038966959.1 Gene:Zfp462 / 362522 RGDID:1562123 Length:2565 Species:Rattus norvegicus


Alignment Length:644 Identity:111/644 - (17%)
Similarity:188/644 - (29%) Gaps:244/644 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LSTGPHSPPMTFRCERCDSFETSSRASLLLHV-----------------VQCLAGQAAAAAAAA- 120
            |.:||.....||:|:.||| :..|.|.|..|:                 .|.|:.|..|..|.| 
  Rat  1879 LGSGPRFQNSTFQCKHCDS-KLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFAD 1942

  Fly   121 -----------------------------------------------------AASARLKSEDLQ 132
                                                                 |.||.:|.| .:
  Rat  1943 FKQERPFGHLEEAPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGSVPAVSAAVKQE-AE 2006

  Fly   133 EPENMSLGHMEGGKGDGQTGNGSSSSASSSPAGNSGGG--------------GGGNSSSRKVFEC 183
            :|.::.|...|..:           .||.:..|...||              ||        :.|
  Rat  2007 DPSHLFLDGFEAAR-----------DASGTLVGRVDGGHCLLDGMLEDETRPGG--------YHC 2052

  Fly   184 DVCNMKFSNGANMRRHKMRH------TGVKPYECRVCQKRFFRKDHLAEHFTT-HTKTLPYHCPI 241
            ..|:....:...:|.|:..|      |....|.|:.|......:.:|..|..| |....|:.|.:
  Rat  2053 SQCDRVLMSMQGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKL 2117

  Fly   242 CNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAGSMKSLRIHFFNRHGIDLDNPGPGGTSSL 306
            |:........::.|....|.|:|  ...|..||:...::..|:.|....||..|..|.|...|  
  Rat  2118 CSFKSSYNSRLKTHILKAHAGEH--AYKCSWCSFSTMTISQLKEHSLKVHGKALTLPRPRIVS-- 2178

  Fly   307 LLALESQASAAAAAAA--------ASYVPPGLSPVPVQSQSQQQQQQQVA------PPASDSGES 357
            ||:..:..|:..|..|        :||    ..|..||.|....|...:|      .|...||.:
  Rat  2179 LLSSHAHHSSQKATPAEEVEDSNDSSY----SEPPDVQQQLNHYQSAALARNNSRVSPVPPSGTA 2239

  Fly   358 MRSLENATPPMH-----------------------------------------FLTPHVEI--ST 379
            ..:.:.|...:|                                         ..|.|||.  |.
  Rat  2240 AGTEQKAEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYTGFKSAFTMHVEAGHSA 2304

  Fly   380 LGESGNTELFNLICVWRESALQGNNNNNNNNNCATNNNNNINGASNNCNSISNGNAESNGDKVKD 444
            :.|.|..:|...:|::.                 |....|                      :.|
  Rat  2305 VPEEGPKDLRCPLCLYH-----------------TKYKRN----------------------MID 2330

  Fly   445 RALIMQSPVELPMD-CNTKATPIT------------SSTTASSLSGGLKSHHQ-HP------HHH 489
            ..::.:....:|:: |.:|.:...            :.::..||...::.|:: .|      ::.
  Rat  2331 HIVLHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELRPYKCQLCYYE 2395

  Fly   490 HHH------HHHHENHITPSISLI-PIKQEPMSEDMDKKDLMNGSDPSSDTEQASNNNN 541
            ..|      |...|:.::.:..|: .:..:.:.:..:|.:..:..|...|.|.:|...:
  Rat  2396 TKHTEELDTHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKDDEMSSKTED 2454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12769NP_001286181.1 C2H2 Zn finger 183..203 CDD:275368 4/19 (21%)
zf-H2C2_2 195..218 CDD:290200 7/28 (25%)
C2H2 Zn finger 211..231 CDD:275368 5/20 (25%)
C2H2 Zn finger 239..255 CDD:275368 2/15 (13%)
C2H2 Zn finger 662..689 CDD:275371
C2H2 Zn finger 690..712 CDD:275371
Zfp462XP_038966959.1 C2H2 Zn finger 2052..2072 CDD:275368 4/19 (21%)
zf-H2C2_5 2084..2108 CDD:404746 6/23 (26%)
C2H2 Zn finger 2086..2106 CDD:275368 4/19 (21%)
C2H2 Zn finger 2115..2136 CDD:275368 3/20 (15%)
C2H2 Zn finger 2144..2165 CDD:275368 5/20 (25%)
C2H2 Zn finger 2315..2335 CDD:275368 4/58 (7%)
C2H2 Zn finger 2361..2381 CDD:275368 2/19 (11%)
C2H2 Zn finger 2389..2410 CDD:275368 2/20 (10%)
C2H2 Zn finger 2475..2495 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345873
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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