DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12769 and Zfp462

DIOPT Version :10

Sequence 1:NP_001286181.1 Gene:CG12769 / 35770 FlyBaseID:FBgn0033252 Length:713 Species:Drosophila melanogaster
Sequence 2:XP_038966959.1 Gene:Zfp462 / 362522 RGDID:1562123 Length:2565 Species:Rattus norvegicus


Alignment Length:644 Identity:111/644 - (17%)
Similarity:188/644 - (29%) Gaps:244/644 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LSTGPHSPPMTFRCERCDSFETSSRASLLLHV-----------------VQCLAGQAAAAAAAA- 120
            |.:||.....||:|:.||| :..|.|.|..|:                 .|.|:.|..|..|.| 
  Rat  1879 LGSGPRFQNSTFQCKHCDS-KLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFAD 1942

  Fly   121 -----------------------------------------------------AASARLKSEDLQ 132
                                                                 |.||.:|.| .:
  Rat  1943 FKQERPFGHLEEAPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGSVPAVSAAVKQE-AE 2006

  Fly   133 EPENMSLGHMEGGKGDGQTGNGSSSSASSSPAGNSGGG--------------GGGNSSSRKVFEC 183
            :|.::.|...|..:           .||.:..|...||              ||        :.|
  Rat  2007 DPSHLFLDGFEAAR-----------DASGTLVGRVDGGHCLLDGMLEDETRPGG--------YHC 2052

  Fly   184 DVCNMKFSNGANMRRHKMRH------TGVKPYECRVCQKRFFRKDHLAEHFTT-HTKTLPYHCPI 241
            ..|:....:...:|.|:..|      |....|.|:.|......:.:|..|..| |....|:.|.:
  Rat  2053 SQCDRVLMSMQGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKL 2117

  Fly   242 CNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAGSMKSLRIHFFNRHGIDLDNPGPGGTSSL 306
            |:........::.|....|.|:|  ...|..||:...::..|:.|....||..|..|.|...|  
  Rat  2118 CSFKSSYNSRLKTHILKAHAGEH--AYKCSWCSFSTMTISQLKEHSLKVHGKALTLPRPRIVS-- 2178

  Fly   307 LLALESQASAAAAAAA--------ASYVPPGLSPVPVQSQSQQQQQQQVA------PPASDSGES 357
            ||:..:..|:..|..|        :||    ..|..||.|....|...:|      .|...||.:
  Rat  2179 LLSSHAHHSSQKATPAEEVEDSNDSSY----SEPPDVQQQLNHYQSAALARNNSRVSPVPPSGTA 2239

  Fly   358 MRSLENATPPMH-----------------------------------------FLTPHVEI--ST 379
            ..:.:.|...:|                                         ..|.|||.  |.
  Rat  2240 AGTEQKAEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYTGFKSAFTMHVEAGHSA 2304

  Fly   380 LGESGNTELFNLICVWRESALQGNNNNNNNNNCATNNNNNINGASNNCNSISNGNAESNGDKVKD 444
            :.|.|..:|...:|::.                 |....|                      :.|
  Rat  2305 VPEEGPKDLRCPLCLYH-----------------TKYKRN----------------------MID 2330

  Fly   445 RALIMQSPVELPMD-CNTKATPIT------------SSTTASSLSGGLKSHHQ-HP------HHH 489
            ..::.:....:|:: |.:|.:...            :.::..||...::.|:: .|      ::.
  Rat  2331 HIVLHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELRPYKCQLCYYE 2395

  Fly   490 HHH------HHHHENHITPSISLI-PIKQEPMSEDMDKKDLMNGSDPSSDTEQASNNNN 541
            ..|      |...|:.::.:..|: .:..:.:.:..:|.:..:..|...|.|.:|...:
  Rat  2396 TKHTEELDTHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKDDEMSSKTED 2454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12769NP_001286181.1 C2H2 Zn finger 183..203 CDD:275368 4/19 (21%)
zf-H2C2_2 195..218 CDD:463886 7/28 (25%)
C2H2 Zn finger 211..231 CDD:275368 5/20 (25%)
C2H2 Zn finger 239..255 CDD:275368 2/15 (13%)
C2H2 Zn finger 662..689 CDD:275371
C2H2 Zn finger 690..712 CDD:275371
Zfp462XP_038966959.1 C2H2 Zn finger 2052..2072 CDD:275368 4/19 (21%)
zf-H2C2_5 2084..2108 CDD:404746 6/23 (26%)
C2H2 Zn finger 2086..2106 CDD:275368 4/19 (21%)
C2H2 Zn finger 2115..2136 CDD:275368 3/20 (15%)
C2H2 Zn finger 2144..2165 CDD:275368 5/20 (25%)
C2H2 Zn finger 2315..2335 CDD:275368 4/58 (7%)
C2H2 Zn finger 2361..2381 CDD:275368 2/19 (11%)
C2H2 Zn finger 2389..2410 CDD:275368 2/20 (10%)
C2H2 Zn finger 2475..2495 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.