DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12769 and Zbtb39

DIOPT Version :9

Sequence 1:NP_001286181.1 Gene:CG12769 / 35770 FlyBaseID:FBgn0033252 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_001124009.1 Gene:Zbtb39 / 299510 RGDID:1306532 Length:711 Species:Rattus norvegicus


Alignment Length:233 Identity:59/233 - (25%)
Similarity:89/233 - (38%) Gaps:56/233 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LHHNAMALRSLKDAASSASESELQEPRSPTPTPTNLSTGPHSPPMTFRCERC-DSFETSSRASLL 102
            |.|..:::.|....|||..:..|.|        .:::.......:.|||..| .||.  |.|:..
  Rat   499 LSHLGISVFSCSVCASSFVDWHLLE--------KHMAVHQSLEDVLFRCHLCSQSFR--SEAAYR 553

  Fly   103 LHVVQ--CLAG----QAAAAAAAAAASARLKSEDLQEPENMSLGHMEGGKGDGQTGNGSSSSASS 161
            .||.|  |.:|    .|......|....:|.:||... |.::|        .||.||..      
  Rat   554 YHVSQHKCSSGLDPRPAVGLPHLALQKRKLPAEDFLS-EELAL--------QGQPGNSK------ 603

  Fly   162 SPAGNSGGGGGGNSSSRKVFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAE 226
                               :.|.||..:|::.:....|:..|||.|||:|:||.|.|..:..:..
  Rat   604 -------------------YSCKVCGKRFAHTSEFNYHRRIHTGEKPYQCKVCHKFFRGRSTIKC 649

  Fly   227 HFTTHTKTLPYHCPICNRGFQRQIAMRAHFQNEHVGQH 264
            |..||:..|.|.|.:|.     ..:...:..::|||.|
  Rat   650 HLKTHSGALMYRCTVCG-----HYSSTLNLMSKHVGVH 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12769NP_001286181.1 C2H2 Zn finger 183..203 CDD:275368 5/19 (26%)
zf-H2C2_2 195..218 CDD:290200 11/22 (50%)
C2H2 Zn finger 211..231 CDD:275368 6/19 (32%)
C2H2 Zn finger 239..255 CDD:275368 2/15 (13%)
C2H2 Zn finger 662..689 CDD:275371
C2H2 Zn finger 690..712 CDD:275371
Zbtb39NP_001124009.1 BTB_POZ_ZBTB39 4..126 CDD:349533
C2H2 Zn finger 344..365 CDD:275368
C2H2 Zn finger 373..393 CDD:275368
C2H2 Zn finger 401..419 CDD:275368
C2H2 Zn finger 452..473 CDD:275368
C2H2 Zn finger 481..501 CDD:275368 1/1 (100%)
C2H2 Zn finger 509..529 CDD:275368 5/27 (19%)
C2H2 Zn finger 539..559 CDD:275368 8/21 (38%)
zf-C2H2 604..626 CDD:395048 5/21 (24%)
C2H2 Zn finger 606..626 CDD:275368 5/19 (26%)
zf-H2C2_2 618..642 CDD:404364 11/23 (48%)
C1 620..>667 CDD:412127 19/51 (37%)
C2H2 Zn finger 634..654 CDD:275368 6/19 (32%)
C2H2 Zn finger 662..682 CDD:275368 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345878
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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