DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12769 and hb

DIOPT Version :10

Sequence 1:NP_001286181.1 Gene:CG12769 / 35770 FlyBaseID:FBgn0033252 Length:713 Species:Drosophila melanogaster
Sequence 2:XP_061510668.1 Gene:hb / 1278884 VectorBaseID:AGAMI1_001557 Length:723 Species:Anopheles gambiae


Alignment Length:745 Identity:154/745 - (20%)
Similarity:234/745 - (31%) Gaps:253/745 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 AASSASESELQEPRSPTPT------------PTNLSTGPHSPPMTFRCERC--DSFETSSRASLL 102
            ||....:.:..:.|..||.            ||:| |..|:|||.....:.  :|.||.:     
Mosquito   148 AAQQQQQHQQHQQRLATPNRMYGNGTGKVELPTSL-TPTHTPPMDVTPPKSPKESLETPT----- 206

  Fly   103 LHVVQCLAGQAAAAAAAAAASARLKSEDLQEPENMSLGHMEGGKGDGQTGNGSSSSASSSPAGNS 167
                                    |.||       :....|.|..||    .........|..||
Mosquito   207 ------------------------KEED-------AGSDCEDGSYDG----SEDEDGIRKPKVNS 236

  Fly   168 GGGGGGNSSSRKVFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFF---RKDHLAEHFT 229
            .|       ..|.|.|..|........:...|...|  :||.:...|.|..|   .|.||..|..
Mosquito   237 HG-------QVKKFRCKQCEFVAVTKLSFWEHTRSH--IKPEKMLTCPKCPFVTEYKHHLEYHLR 292

  Fly   230 THTKTLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLV--KTCPLCSYRAGSMKSLRIHFFNRHG 292
            .|.::.|:.||.|:..     .:.....|.|:..|..|  ..|..|:|......||::| ..::.
Mosquito   293 NHQRSKPFQCPKCSYS-----CVNKSMLNSHMKSHSNVFQYRCADCNYATKYCHSLKLH-LRKYA 351

  Fly   293 ------IDLDNPGPGGTSSLLLALESQASAAAAAAAASYVPPGLSPVPVQSQSQQQQQQQVAP-- 349
                  ::||     ||.:.|..::...:.....|.    |...:...:..|.|.||:||..|  
Mosquito   352 HKPDVVLNLD-----GTPNPLPIIDVYGTRRGPKAK----PQKNADKHLLKQEQAQQEQQSQPLK 407

  Fly   350 ----------------PASDSGESMRSLENATPP--------MHFLTPHVEISTLGESGNTELF- 389
                            |.|..|.:.......|||        |..|.||            :|| 
Mosquito   408 QQELTNSGDQSPAPLTPLSQQGMATAPTTPFTPPGSGQTNGLMRNLFPH------------QLFP 460

  Fly   390 -NLICVWRESALQGNNNNNNNNNCATNNNNNINGASNNCNSISNGNAESNGDKVKDRALIMQSPV 453
             .|..:::.:|..|                     |.......|.|.:...|:            
Mosquito   461 NPLAHMFKSAAANG---------------------SLPLFPYLNLNFQMFADQ------------ 492

  Fly   454 ELPMDCNTKATPITSSTTASSLSGGLKSHHQHPHHHHHHHHHHENHITPSISLIPIKQEPMSEDM 518
                                  ..||:...|                  .:|....:|..|::..
Mosquito   493 ----------------------QAGLQQQQQ------------------QLSPRTFQQNLMNQLA 517

  Fly   519 DKKDLMNGSDPSSDTEQASNNNNSSSNNNRITSLIKVSPLKSLLREDLKRRICAKA---NNRITR 580
            .:|  :|||..||.::|   :|:.|         ::.|...|.|.|:|.::|.|.|   :..:.|
Mosquito   518 GEK--LNGSATSSGSDQ---DNDLS---------VRTSSSGSTLGEELLKQITAAAADSSAAVGR 568

  Fly   581 NATPLESNNNN----------------SVLSNSLS-NGSGRGSPGVNGG-----------SGGGG 617
            ||.|.|.:.:.                ||.||..: :.:|:|......|           :...|
Mosquito   569 NALPQEDSESETTQAAPLQASFDEFPASVSSNPRTPSTTGKGERSRRKGRAFKLERLTEPATSSG 633

  Fly   618 GGGPPTPATPSATNGASSTPICNGTITSTGQDGDLLINRKLILTCHFCGIEFPDETLYFLHKGCH 682
            |..........|...|.|||:   |:....:.......|.  |.|.:|.|.|.|:.||.:|.|.|
Mosquito   634 GSNDMDTHYEHAEEAAVSTPV---TVAVARESPAPPKERS--LECKYCDIAFRDDVLYTIHMGYH 693

  Fly   683 CESNPWRCNICGEQLNNVYEFNSHLLSKSH 712
            ...:.::||:|||:.::...|..|:..|:|
Mosquito   694 GYDDVFKCNMCGEKSDDRIGFFLHIARKAH 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12769NP_001286181.1 C2H2 Zn finger 183..203 CDD:275368 3/19 (16%)
zf-H2C2_2 195..218 CDD:463886 6/22 (27%)
C2H2 Zn finger 211..231 CDD:275368 7/22 (32%)
C2H2 Zn finger 239..255 CDD:275368 3/15 (20%)
C2H2 Zn finger 662..689 CDD:275371 10/26 (38%)
C2H2 Zn finger 690..712 CDD:275371 8/21 (38%)
hbXP_061510668.1 None

Return to query results.
Submit another query.