DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14762 and LRRC4B

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001073926.1 Gene:LRRC4B / 94030 HGNCID:25042 Length:713 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380
LRR_RI 93..384 CDD:238064
leucine-rich repeat 107..129 CDD:275380
leucine-rich repeat 131..154 CDD:275380
LRR_8 154..214 CDD:290566
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..203 CDD:275380
leucine-rich repeat 204..227 CDD:275380
LRR_8 226..286 CDD:290566
leucine-rich repeat 228..251 CDD:275380
leucine-rich repeat 252..275 CDD:275380
LRR_8 276..335 CDD:290566
leucine-rich repeat 276..300 CDD:275380
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..349 CDD:275380
LRR_8 349..409 CDD:290566
leucine-rich repeat 350..373 CDD:275380
LRRC4BNP_001073926.1 LRRNT 57..90 CDD:214470
LRR <76..297 CDD:227223
LRR 1 87..108
leucine-rich repeat 88..111 CDD:275380
LRR 2 111..132
leucine-rich repeat 112..135 CDD:275380
LRR 3 135..156
leucine-rich repeat 136..159 CDD:275380
LRR 4 159..180
leucine-rich repeat 160..183 CDD:275380
LRR 5 183..205
leucine-rich repeat 184..208 CDD:275380
LRR 6 208..229
leucine-rich repeat 209..230 CDD:275380
LRR 7 230..251
leucine-rich repeat 231..254 CDD:275380
LRR 8 254..275
leucine-rich repeat 255..278 CDD:275380
LRR 9 278..299
leucine-rich repeat 279..300 CDD:275380
LRRCT 311..361 CDD:214507
I-set 364..453 CDD:254352
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 497..551
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..713
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.