DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and slit3

DIOPT Version :10

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001072738.1 Gene:slit3 / 780195 XenbaseID:XB-GENE-991050 Length:1519 Species:Xenopus tropicalis


Alignment Length:458 Identity:118/458 - (25%)
Similarity:184/458 - (40%) Gaps:124/458 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 QLDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAF 197
            :||:..|.:..:.......|.:|.:|:|..|:|::|...||:.|:.||.:.|.:||: |:.||..
 Frog    61 RLDMDKNNITRITKTDFAGLKNLRVLHLEDNQISIIERGAFQDLKQLERMRLNKNKL-QVLPELL 124

  Fly   198 RGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMI 262
            ......:.||:|..|.:..:|:|:...::.:|.|::..|:|..|.:|.|..|:.|:.|.|.:|.|
 Frog   125 FQNNAKLTRLDLSENQIQGLPRKSFRGITDVKNLQLDNNQISCIEDGVFRALRELEILTLNNNNI 189

  Fly   263 TTVPANVFSHLTLLNSLELEGN------------------------------------KISVIDK 291
            |.:|...|:|:..:.:|.|..|                                    .::.:.|
 Frog   190 TRIPLTSFNHMPKIRTLRLHSNYLYCDCHLTWLSDWLRQRKTIGQFTFCMSPVHLRGFNVADVQK 254

  Fly   292 DAF----------------------------------KGLEE---NLQ----YLRLGDNQIHTIP 315
            ..|                                  |||.|   ||.    .:||..|.|..||
 Frog   255 KDFVCPGTQSEPPSCNANAVSCPSACTCSNNVVDCRGKGLTEIPANLPEGIIEIRLEQNSIKAIP 319

  Fly   316 SEALRPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETL--- 377
            :....|..:|:.:|:..|.|:.:|.|||:|. .|||.|.|..|.|..:|..||:.|.||:.|   
 Frog   320 AGVFTPYKKLKRIDISKNQISEIAADAFSGL-KSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLN 383

  Fly   378 -------------NLQN--------NKLQRIPQDIMEPVIDTLRIIDITDNPLNCSCELTWFPKL 421
                         :|||        ||||.|.:.:..| :.:::.:.:..||..|.|.|.|....
 Frog   384 ANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP-LQSIQTLHLAQNPFVCDCHLKWLADY 447

  Fly   422 LED---------------LKNKDDEMSQKKKPLCHMSLDNR-----EYFVQAMPTEKMHCAGLNV 466
            |:|               |.||.....:.||..|..|.|.|     :.|:..:..||..|.|..|
 Frog   448 LQDNPIETSGARCTSPRRLANKRISQIKSKKFRCTGSEDYRSKFSGDCFMDLVCPEKCRCEGTIV 512

  Fly   467 SPS 469
            ..|
 Frog   513 DCS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380
leucine-rich repeat 107..129 CDD:275380
LRR <131..410 CDD:443914 96/377 (25%)
leucine-rich repeat 131..154 CDD:275380 4/20 (20%)
leucine-rich repeat 155..178 CDD:275380 9/22 (41%)
leucine-rich repeat 179..203 CDD:275380 8/23 (35%)
leucine-rich repeat 204..227 CDD:275380 6/22 (27%)
leucine-rich repeat 228..251 CDD:275380 8/22 (36%)
leucine-rich repeat 252..275 CDD:275380 9/22 (41%)
leucine-rich repeat 276..300 CDD:275380 9/96 (9%)
leucine-rich repeat 301..324 CDD:275380 8/26 (31%)
leucine-rich repeat 325..349 CDD:275380 9/23 (39%)
leucine-rich repeat 350..373 CDD:275380 10/22 (45%)
slit3NP_001072738.1 LRRNT 29..60 CDD:214470
LRR <58..>213 CDD:443914 47/152 (31%)
leucine-rich repeat 60..82 CDD:275380 4/20 (20%)
leucine-rich repeat 83..106 CDD:275380 9/22 (41%)
leucine-rich repeat 107..130 CDD:275380 8/23 (35%)
leucine-rich repeat 131..154 CDD:275380 6/22 (27%)
leucine-rich repeat 155..178 CDD:275380 8/22 (36%)
leucine-rich repeat 179..202 CDD:275380 9/22 (41%)
leucine-rich repeat 203..305 CDD:275380 11/101 (11%)
LRRCT 211..260 CDD:214507 3/48 (6%)
LRRNT 276..307 CDD:214470 6/30 (20%)
leucine-rich repeat 307..328 CDD:275380 7/20 (35%)
LRR <327..662 CDD:443914 56/191 (29%)
leucine-rich repeat 329..352 CDD:275380 9/23 (39%)
leucine-rich repeat 353..373 CDD:275380 9/19 (47%)
leucine-rich repeat 377..400 CDD:275380 3/22 (14%)
leucine-rich repeat 401..422 CDD:275380 6/21 (29%)
leucine-rich repeat 425..516 CDD:275380 24/91 (26%)
leucine-rich repeat 533..554 CDD:275380
leucine-rich repeat 555..578 CDD:275380
leucine-rich repeat 579..602 CDD:275380
leucine-rich repeat 603..626 CDD:275380
leucine-rich repeat 627..650 CDD:275380
PCC 632..>719 CDD:188093
leucine-rich repeat 651..741 CDD:275380
LRR <723..>855 CDD:443914
leucine-rich repeat 742..772 CDD:275380
leucine-rich repeat 773..796 CDD:275380
leucine-rich repeat 797..820 CDD:275380
leucine-rich repeat 821..842 CDD:275380
PCC 826..>901 CDD:188093
EGF 916..947 CDD:394967
EGF_CA 952..989 CDD:238011
EGF_CA 994..1027 CDD:238011
EGF_CA 1031..1068 CDD:238011
EGF_CA 1070..1106 CDD:238011
LamG 1155..1308 CDD:238058
GHB_like 1454..1517 CDD:473907
Blue background indicates that the domain is not in the aligned region.

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