DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and Lrfn2

DIOPT Version :10

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_081728.2 Gene:Lrfn2 / 70530 MGIID:1917780 Length:788 Species:Mus musculus


Alignment Length:298 Identity:79/298 - (26%)
Similarity:124/298 - (41%) Gaps:70/298 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 LNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFS 271
            |.||||.:.:|.::..:.::.|..|.:..|.|..|....|..|:||.||.|..|.:.::..:...
Mouse    57 LRLGGNFIIHIGRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLR 121

  Fly   272 HLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNIN 336
            .|..|..|.:..|::..|..|||:.....|:.|.|..|.:|.:|.:::|.:..|..|.|.:|.::
Mouse   122 GLVNLQHLIVNNNQLGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLD 186

  Fly   337 VLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEPVIDTLRI 401
            .:||.         ||.:|||                |..|:|.:|:||::|.|   |:....:.
Mouse   187 HIAEG---------TFADLQK----------------LARLDLTSNRLQKLPPD---PIFARSQA 223

  Fly   402 IDIT-------------DNPLNCSCELTWFPKLLEDLKNKDDEM-------SQKKKPLCHMSLDN 446
            ..:|             .|||:|:|||.|..:|     .:||::       |.|.:...|:   .
Mouse   224 SLLTATPFAPPLSFSFGGNPLHCNCELLWLRRL-----ERDDDLETCGSPGSLKGRYFWHI---R 280

  Fly   447 REYFVQAMPTEKMHCAGLNV--------------SPSP 470
            .|.||...|....|...|.|              .|||
Mouse   281 EEEFVCEPPLITQHTHKLLVLEGQAATLKCKAIGDPSP 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380
leucine-rich repeat 107..129 CDD:275380
LRR <131..410 CDD:443914 57/215 (27%)
leucine-rich repeat 131..154 CDD:275380
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..203 CDD:275380
leucine-rich repeat 204..227 CDD:275380 6/19 (32%)
leucine-rich repeat 228..251 CDD:275380 7/22 (32%)
leucine-rich repeat 252..275 CDD:275380 6/22 (27%)
leucine-rich repeat 276..300 CDD:275380 7/23 (30%)
leucine-rich repeat 301..324 CDD:275380 7/22 (32%)
leucine-rich repeat 325..349 CDD:275380 6/23 (26%)
leucine-rich repeat 350..373 CDD:275380 5/22 (23%)
Lrfn2NP_081728.2 LRR 1 53..74 6/16 (38%)
leucine-rich repeat 54..77 CDD:275380 6/19 (32%)
LRR <56..>214 CDD:443914 51/181 (28%)
LRR 2 77..98 6/20 (30%)
leucine-rich repeat 78..101 CDD:275380 7/22 (32%)
LRR 3 101..122 6/20 (30%)
leucine-rich repeat 102..125 CDD:275380 6/22 (27%)
LRR 4 125..146 7/20 (35%)
leucine-rich repeat 126..150 CDD:275380 7/23 (30%)
LRR 5 150..171 6/20 (30%)
leucine-rich repeat 151..174 CDD:275380 7/22 (32%)
LRR 6 174..195 8/29 (28%)
leucine-rich repeat 175..198 CDD:275380 9/31 (29%)
LRR 7 198..219 10/39 (26%)
LRRCT 242..286 CDD:214507 16/51 (31%)
Ig 289..376 CDD:472250 7/30 (23%)
Ig strand B 306..310 CDD:409421 0/3 (0%)
Ig strand C 319..323 CDD:409421 79/298 (27%)
Ig strand E 342..346 CDD:409421
Ig strand F 356..361 CDD:409421
Ig strand G 369..372 CDD:409421
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..423
fn3 428..493 CDD:394996
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 620..655
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 668..711
PDZ-binding 785..788
Blue background indicates that the domain is not in the aligned region.

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