DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14762 and SLIT3

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001258875.2 Gene:SLIT3 / 6586 HGNCID:11087 Length:1530 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380
LRR_RI 93..384 CDD:238064
leucine-rich repeat 107..129 CDD:275380
leucine-rich repeat 131..154 CDD:275380
LRR_8 154..214 CDD:290566
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..203 CDD:275380
leucine-rich repeat 204..227 CDD:275380
LRR_8 226..286 CDD:290566
leucine-rich repeat 228..251 CDD:275380
leucine-rich repeat 252..275 CDD:275380
LRR_8 276..335 CDD:290566
leucine-rich repeat 276..300 CDD:275380
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..349 CDD:275380
LRR_8 349..409 CDD:290566
leucine-rich repeat 350..373 CDD:275380
SLIT3NP_001258875.2 LRRNT 33..64 CDD:214470
LRR <62..>220 CDD:227223
LRR 1 62..83
leucine-rich repeat 64..86 CDD:275380
LRR 2 86..107
leucine-rich repeat 87..110 CDD:275380
internalin_A 107..>478 CDD:380193
LRR 3 110..131
leucine-rich repeat 111..134 CDD:275380
LRR 4 134..155
leucine-rich repeat 135..158 CDD:275380
LRR 5 158..179
leucine-rich repeat 159..182 CDD:275380
LRR 6 182..203
leucine-rich repeat 183..206 CDD:275380
leucine-rich repeat 207..308 CDD:275380
LRR 7 308..329
leucine-rich repeat 309..332 CDD:275380
LRR_8 311..367 CDD:338972
LRR 8 332..353
leucine-rich repeat 333..356 CDD:275380
LRR 9 356..377
leucine-rich repeat 357..377 CDD:275380
LRR 10 380..401
leucine-rich repeat 381..404 CDD:275380
LRR 11 404..425
leucine-rich repeat 405..428 CDD:275380
LRRNT 505..535 CDD:214470
LRR 12 533..554
LRR_8 534..593 CDD:338972
leucine-rich repeat 534..558 CDD:275380
LRR 13 558..579
leucine-rich repeat 559..582 CDD:275380
LRR_8 582..641 CDD:338972
LRR 14 582..603
leucine-rich repeat 583..606 CDD:275380
LRR 15 606..627
leucine-rich repeat 607..630 CDD:275380
LRR 16 630..651
leucine-rich repeat 631..654 CDD:275380
PCC 636..>714 CDD:188093
leucine-rich repeat 655..745 CDD:275380
LRRNT 725..756 CDD:214470
LRR <743..>869 CDD:227223
leucine-rich repeat 746..776 CDD:275380
LRR 17 753..775
LRR_8 776..835 CDD:338972
LRR 18 776..797
leucine-rich repeat 777..800 CDD:275380
LRR 19 800..821
leucine-rich repeat 801..824 CDD:275380
LRR 20 824..845
leucine-rich repeat 825..846 CDD:275380
PCC 830..>912 CDD:188093
EGF_CA 963..1001 CDD:238011
EGF_CA 1005..1038 CDD:238011
EGF_CA 1042..1079 CDD:238011
EGF_CA 1081..1117 CDD:238011
EGF 1130..1160 CDD:333761
LamG 1188..1321 CDD:214598
EGF 1379..1407 CDD:333761
GHB_like <1473..1528 CDD:389804
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.