DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and SLIT1

DIOPT Version :10

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_003052.2 Gene:SLIT1 / 6585 HGNCID:11085 Length:1534 Species:Homo sapiens


Alignment Length:579 Identity:130/579 - (22%)
Similarity:200/579 - (34%) Gaps:197/579 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 CPEQSEIAPCICTVKKNGLDILCETTDLAHITKSMGTLKGKSPIIFYLKLRHNNLPKLQGFVFLA 103
            ||     |.|.||    |..:.|..|.|..|.|                    |:|:        
Human    34 CP-----ALCTCT----GTTVDCHGTGLQAIPK--------------------NIPR-------- 61

  Fly   104 LDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVI 168
             :...|.::.:::..|.:|..    |||.||.|                     |.|..|:|..:
Human    62 -NTERLELNGNNITRIHKNDF----AGLKQLRV---------------------LQLMENQIGAV 100

  Fly   169 HNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEI 233
            ...||:.::.||.|.|..|::..: ||........:.||:|..|.:..||:||....:.||.|::
Human   101 ERGAFDDMKELERLRLNRNQLHML-PELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQL 164

  Fly   234 QENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGN-------------- 284
            .:|:|..|.||.|..|:.|:.|.|.:|.|||:|.:.|:|:..|.:..|..|              
Human   165 DKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQW 229

  Fly   285 ----------------------KISVIDKDAF--------------------------------- 294
                                  .::.:.|..|                                 
Human   230 LRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMCTCSNGIVD 294

  Fly   295 ---KG-------LEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTG---- 345
               ||       |.|.:..:||..|.|.:||..|..|..:||.:||.||.|..:|.|||.|    
Human   295 CRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359

  Fly   346 -----FGDSLT--------------FLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDI 391
                 :|:.:|              .|.|..|.|..:....|::|.:|..|:|.:||:|.:.:..
Human   360 NSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGT 424

  Fly   392 MEPVIDTLRIIDITDNPLNCSCELTWFPKLLED---------------LKNKDDEMSQKKKPLCH 441
            ... :..::.:.:..||..|.|.|.|....|..               |.||.....:.||..|.
Human   425 FTS-LRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCS 488

  Fly   442 MSLDNREYFVQAMPTEKMH--CAGLNVSPSPTSGGLMRILQVNILAQIAVCSVAFLTSV 498
            .   ..:||:......:::  |....|.|.          :....|.:..||...||.:
Human   489 A---KEQYFIPGTEDYQLNSECNSDVVCPH----------KCRCEANVVECSSLKLTKI 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 2/19 (11%)
leucine-rich repeat 107..129 CDD:275380 3/21 (14%)
LRR <131..410 CDD:443914 90/380 (24%)
leucine-rich repeat 131..154 CDD:275380 4/22 (18%)
leucine-rich repeat 155..178 CDD:275380 6/22 (27%)
leucine-rich repeat 179..203 CDD:275380 7/23 (30%)
leucine-rich repeat 204..227 CDD:275380 8/22 (36%)
leucine-rich repeat 228..251 CDD:275380 10/22 (45%)
leucine-rich repeat 252..275 CDD:275380 10/22 (45%)
leucine-rich repeat 276..300 CDD:275380 8/102 (8%)
leucine-rich repeat 301..324 CDD:275380 8/22 (36%)
leucine-rich repeat 325..349 CDD:275380 13/32 (41%)
leucine-rich repeat 350..373 CDD:275380 7/36 (19%)
SLIT1NP_003052.2 LRR <28..>217 CDD:443914 67/246 (27%)
leucine-rich repeat 43..62 CDD:275380 7/47 (15%)
LRR 1 62..83 3/24 (13%)
leucine-rich repeat 63..86 CDD:275380 6/26 (23%)
LRR 2 86..107 9/41 (22%)
leucine-rich repeat 87..110 CDD:275380 8/43 (19%)
LRR 3 110..131 7/21 (33%)
leucine-rich repeat 111..134 CDD:275380 7/23 (30%)
LRR 4 134..155 8/20 (40%)
leucine-rich repeat 135..158 CDD:275380 8/22 (36%)
LRR 5 158..179 9/20 (45%)
leucine-rich repeat 159..182 CDD:275380 10/22 (45%)
LRR 6 182..203 9/20 (45%)
leucine-rich repeat 183..206 CDD:275380 10/22 (45%)
PCC 188..>328 CDD:188093 23/139 (17%)
leucine-rich repeat 207..334 CDD:275380 17/126 (13%)
LRR 7 310..331 7/20 (35%)
LRR_8 312..369 CDD:404697 21/56 (38%)
LRR 8 334..355 11/20 (55%)
leucine-rich repeat 335..358 CDD:275380 12/22 (55%)
LRR 9 358..379 2/20 (10%)
leucine-rich repeat 359..379 CDD:275380 2/19 (11%)
LRR 10 382..403 5/20 (25%)
leucine-rich repeat 383..406 CDD:275380 6/22 (27%)
LRR_8 389..441 CDD:404697 11/52 (21%)
LRR 11 406..427 6/20 (30%)
leucine-rich repeat 407..428 CDD:275380 6/21 (29%)
PCC 412..>475 CDD:188093 12/63 (19%)
leucine-rich repeat 431..528 CDD:275380 20/109 (18%)
LRR 522..>820 CDD:443914 4/13 (31%)
leucine-rich repeat 529..566 CDD:275380 2/6 (33%)
LRR 12 541..562
LRR 13 566..587
leucine-rich repeat 567..590 CDD:275380
LRR 14 590..611
leucine-rich repeat 591..614 CDD:275380
LRR 15 614..635
leucine-rich repeat 615..638 CDD:275380
LRR 16 638..659
leucine-rich repeat 639..660 CDD:275380
PCC 644..>730 CDD:188093
leucine-rich repeat 663..762 CDD:275380
LRRNT 733..760 CDD:396168
LRR 17 762..783
leucine-rich repeat 763..785 CDD:275380
LRR 18 785..806
leucine-rich repeat 786..809 CDD:275380
LRR 19 809..830
leucine-rich repeat 810..830 CDD:275380
LRR 20 833..854
leucine-rich repeat 834..857 CDD:275380
PCC 842..>1002 CDD:188093
EGF_CA 1005..1041 CDD:238011
EGF_CA 1044..1080 CDD:238011
EGF_CA 1085..1119 CDD:238011
EGF_CA <1136..1163 CDD:238011
LamG 1189..1322 CDD:214598
Blue background indicates that the domain is not in the aligned region.

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