DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14762 and zgc:153913

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001073448.1 Gene:zgc:153913 / 559700 ZFINID:ZDB-GENE-061103-397 Length:496 Species:Danio rerio


Alignment Length:490 Identity:121/490 - (24%)
Similarity:203/490 - (41%) Gaps:93/490 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CTMVVTVVLLLQVLVMDQVLGQGPPQTQVCPEQSEIAPCICTVKKNGLDILCETTDLAHITKSMG 74
            |.:|:.|::.|...|             .|||     ||.|.   :|..::|...          
Zfish     5 CAVVLLVLIHLYCGV-------------CCPE-----PCQCF---SGSKLVCSDD---------- 38

  Fly    75 TLKGKSPIIFYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENA------LSSLGAGLTQ 133
                          |..:||     |.::..:|.|.:..|.:..:::.:      ||.|      
Zfish    39 --------------RMKSLP-----VNISTQVRELIVVASGIPDLDQQSFPETLRLSKL------ 78

  Fly   134 LDVSLNQM-KTVPSQALQHLFHLLILNLNHNKITV-IHNNAFEGLETLEILTLYENKITQIDPEA 196
              |.||.| |:|..:|.:.|..|..|.::.|...: :....|..|..|..|.|..||::.:|...
Zfish    79 --VFLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSSLTNLTRLLLNNNKLSGVDAGL 141

  Fly   197 FRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNM 261
            |..|. .::.|.|.||.|:.:..:....|..|::|::..|:|.::|...|:....|..|.|..|.
Zfish   142 FHSLH-QLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANK 205

  Fly   262 ITTVPANVFSHLTLLNSLELEGNKISVIDKDAF----------KGLEENL-----------QYLR 305
            |..:|..:|:||..|..|.|..|.|.|:...:|          |.|.|.|           .||.
Zfish   206 IPNLPDGIFTHLDHLQELNLRSNLIRVLTPGSFPASLKTLILKKNLLEKLTNAVFHTLHYITYLD 270

  Fly   306 LGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFEN 370
            |..|.:..:|::..:.|..|..|||..|.|:.||...|.|. .|:..:.||||.:..:.:.|.::
Zfish   271 LSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGL-FSIKSVYLQKNSLISVDAHLLKD 334

  Fly   371 LNSLETLNLQNNKLQRIPQDIMEPVIDTLRIIDITDNPLNCSCELTWFPKLLEDLKNKDDEMSQK 435
            .:.|:.|:|.||.|:.||....|. :|...:.::..||.:|.|.:.:|   .:.||.....:...
Zfish   335 QHDLQLLDLSNNSLRSIPSGFFED-LDFQCVFELRGNPWSCDCGIHYF---YDWLKYNHKHVKDL 395

  Fly   436 KKPLCHMSLDNREYFVQAMPTEKMHCAGLNVSPSP 470
            .:..|......:.:.::::..|::.|:..:.|.||
Zfish   396 SRVSCEAPELIQGHNLRSVDREQLVCSRNSSSNSP 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 4/19 (21%)
LRR_RI 93..384 CDD:238064 89/319 (28%)
leucine-rich repeat 107..129 CDD:275380 6/27 (22%)
leucine-rich repeat 131..154 CDD:275380 8/23 (35%)
LRR_8 154..214 CDD:290566 17/60 (28%)
leucine-rich repeat 155..178 CDD:275380 5/23 (22%)
leucine-rich repeat 179..203 CDD:275380 8/23 (35%)
leucine-rich repeat 204..227 CDD:275380 6/22 (27%)
LRR_8 226..286 CDD:290566 19/59 (32%)
leucine-rich repeat 228..251 CDD:275380 6/22 (27%)
leucine-rich repeat 252..275 CDD:275380 9/22 (41%)
LRR_8 276..335 CDD:290566 22/79 (28%)
leucine-rich repeat 276..300 CDD:275380 9/33 (27%)
leucine-rich repeat 301..324 CDD:275380 7/33 (21%)
leucine-rich repeat 325..349 CDD:275380 10/23 (43%)
LRR_8 349..409 CDD:290566 17/59 (29%)
leucine-rich repeat 350..373 CDD:275380 5/22 (23%)
zgc:153913NP_001073448.1 leucine-rich repeat 75..98 CDD:275380 11/30 (37%)
LRR_RI 141..>350 CDD:238064 62/210 (30%)
LRR_8 147..206 CDD:290566 16/58 (28%)
leucine-rich repeat 148..171 CDD:275380 6/22 (27%)
leucine-rich repeat 172..195 CDD:275380 6/22 (27%)
LRR_8 194..252 CDD:290566 17/57 (30%)
leucine-rich repeat 196..219 CDD:275380 9/22 (41%)
leucine-rich repeat 220..241 CDD:275380 7/20 (35%)
leucine-rich repeat 242..265 CDD:275380 4/22 (18%)
leucine-rich repeat 266..289 CDD:275380 6/22 (27%)
LRR_8 267..324 CDD:290566 21/57 (37%)
leucine-rich repeat 290..313 CDD:275380 10/23 (43%)
leucine-rich repeat 314..337 CDD:275380 5/22 (23%)
leucine-rich repeat 338..359 CDD:275380 9/21 (43%)
TPKR_C2 370..>404 CDD:301599 8/36 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.