DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and lrfn5b

DIOPT Version :10

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:XP_683575.2 Gene:lrfn5b / 555839 ZFINID:ZDB-GENE-080327-20 Length:765 Species:Danio rerio


Alignment Length:425 Identity:93/425 - (21%)
Similarity:138/425 - (32%) Gaps:178/425 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLQVLVMDQVLGQGPPQTQVCPEQSEIAPCICTVKKNGLDILCETTDLAHITKSMGTLKGKSPII 83
            :|.|.:|..|:.....:.||||::     |||.|....|..||:.                    
Zfish     3 MLLVYLMVVVMALKAQKIQVCPKR-----CICQVLPPNLATLCDK-------------------- 42

  Fly    84 FYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQA 148
                         :|.:|:..:|...|:.                                    
Zfish    43 -------------KGLLFVPPNIDRRTVE------------------------------------ 58

  Fly   149 LQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGND 213
                     |.|..|.||.|....|..:..|..|||..|.|..:.|.||              ||
Zfish    59 ---------LRLGDNFITGIKRKDFANMTKLVDLTLSRNTIGSVAPHAF--------------ND 100

  Fly   214 LTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNS 278
            |.|           |:.|.:..|::..|:...|.|:..|..|||.:|.:|.:....|:.|..|..
Zfish   101 LEN-----------LRALHLDSNRLTHITNDTFSGMSKLHHLILNNNQLTYIHIGAFNDLLALEE 154

  Fly   279 LELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAF 343
            |:                    |.|     |.:...|..|::.:..|..|:|.:|.||.:.|..|
Zfish   155 LD--------------------LSY-----NNLEGAPWIAIQLMISLHTLNLDHNMINYIPEGTF 194

  Fly   344 TGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEPVIDTLRI------- 401
            :|         |||                |:.|::.:|||.::|.|   ||.....:       
Zfish   195 SG---------LQK----------------LKRLDVTSNKLHKLPPD---PVFQRAGVLATSGVL 231

  Fly   402 ------IDITDNPLNCSCELTWFPKLLEDLKNKDD 430
                  :....|||:|:|||.|    |..|:.:||
Zfish   232 GASTFALSFGGNPLHCNCELLW----LRRLRREDD 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 2/19 (11%)
leucine-rich repeat 107..129 CDD:275380 1/21 (5%)
LRR <131..410 CDD:443914 64/291 (22%)
leucine-rich repeat 131..154 CDD:275380 0/22 (0%)
leucine-rich repeat 155..178 CDD:275380 7/22 (32%)
leucine-rich repeat 179..203 CDD:275380 9/23 (39%)
leucine-rich repeat 204..227 CDD:275380 4/22 (18%)
leucine-rich repeat 228..251 CDD:275380 6/22 (27%)
leucine-rich repeat 252..275 CDD:275380 8/22 (36%)
leucine-rich repeat 276..300 CDD:275380 2/23 (9%)
leucine-rich repeat 301..324 CDD:275380 5/22 (23%)
leucine-rich repeat 325..349 CDD:275380 9/23 (39%)
leucine-rich repeat 350..373 CDD:275380 3/22 (14%)
lrfn5bXP_683575.2 leucine-rich repeat 56..79 CDD:275380 8/67 (12%)
LRR <58..>213 CDD:443914 58/274 (21%)
leucine-rich repeat 80..103 CDD:275380 12/36 (33%)
leucine-rich repeat 104..127 CDD:275380 6/22 (27%)
leucine-rich repeat 128..151 CDD:275380 8/22 (36%)
leucine-rich repeat 152..175 CDD:275380 7/47 (15%)
leucine-rich repeat 176..199 CDD:275380 10/31 (32%)
Ig 290..377 CDD:472250
Ig strand B 307..311 CDD:409353
Ig strand C 320..324 CDD:409353
Ig strand E 343..347 CDD:409353
Ig strand F 357..362 CDD:409353
Ig strand G 370..373 CDD:409353
fn3 426..495 CDD:394996
Blue background indicates that the domain is not in the aligned region.

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