DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and Lrrtm4

DIOPT Version :10

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:XP_017448300.1 Gene:Lrrtm4 / 500219 RGDID:1560707 Length:591 Species:Rattus norvegicus


Alignment Length:494 Identity:126/494 - (25%)
Similarity:205/494 - (41%) Gaps:128/494 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGIQLQSGCTMVVTVVLLLQVLVMDQVLGQGPPQTQVCPEQSEIAPCICTVKKNGLDILCETTD 65
            |.|.:|.:....:..:::|...|::..:.|    ..:.||:.     |.|    :|..:.||:..
  Rat     1 MPGFRLITQLKGMSVLLVLFPTLLLVMLTG----AQRACPKN-----CRC----DGKIVYCESHA 52

  Fly    66 LAHITKSM-GTLKGKSPIIFYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGA 129
            .|.|.::: |..:|       |.||.|::.||:...|                           |
  Rat    53 FADIPENISGGSQG-------LSLRFNSIQKLKSNQF---------------------------A 83

  Fly   130 GLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDP 194
            ||.|                     |:.|.|:||.|:.:..:||:|:..|:.|.|..||||.:..
  Rat    84 GLNQ---------------------LIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHN 127

  Fly   195 EAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAH 259
            :.|..:.:                         |:.|::..||::|:....|:||:.|..|.|..
  Rat   128 KTFHPVPN-------------------------LRNLDLSYNKLQTLQSEQFKGLRKLIILHLRS 167

  Fly   260 NMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHR 324
            |.:.|||..||.....|:.|:|..|::..:.::||.||.: |:.|.|..||...|.......|..
  Rat   168 NSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLK-LKELHLEHNQFSKINFAHFPRLFN 231

  Fly   325 LRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQ 389
            ||.:.|:.|.|..::: ..|....||..|:|..|||:.:....|:.|.:|:.|||.:|||..:.|
  Rat   232 LRSIYLQWNRIRSVSQ-GLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQ 295

  Fly   390 DIMEPVIDTLRIIDITDNPLNCS---CELTWFPKLLEDLK-NKDDEMSQKKKPLC----HMS--- 443
            :.:...| :|..|.::.|...||   |.|.::   |::.| ||:..|      :|    |:.   
  Rat   296 ETVNAWI-SLISITLSGNMWECSRSICPLFYW---LKNFKGNKESTM------ICAGPKHIQGEK 350

  Fly   444 -LDNREYF-----VQAMPTEKMHCAGLNVS-----PSPT 471
             .|..|.:     ||.:.||:.|.|.....     |.||
  Rat   351 VSDAVETYNICSDVQVVNTERSHLAPQTPQKPPFFPKPT 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 7/19 (37%)
leucine-rich repeat 107..129 CDD:275380 0/21 (0%)
LRR <131..410 CDD:443914 78/278 (28%)
leucine-rich repeat 131..154 CDD:275380 2/22 (9%)
leucine-rich repeat 155..178 CDD:275380 9/22 (41%)
leucine-rich repeat 179..203 CDD:275380 8/23 (35%)
leucine-rich repeat 204..227 CDD:275380 0/22 (0%)
leucine-rich repeat 228..251 CDD:275380 8/22 (36%)
leucine-rich repeat 252..275 CDD:275380 9/22 (41%)
leucine-rich repeat 276..300 CDD:275380 8/23 (35%)
leucine-rich repeat 301..324 CDD:275380 7/22 (32%)
leucine-rich repeat 325..349 CDD:275380 6/23 (26%)
leucine-rich repeat 350..373 CDD:275380 8/22 (36%)
Lrrtm4XP_017448300.1 leucine-rich repeat 44..62 CDD:275380 4/17 (24%)
leucine-rich repeat 65..87 CDD:275380 11/55 (20%)
LRR 67..>312 CDD:443914 86/320 (27%)
leucine-rich repeat 88..111 CDD:275380 9/22 (41%)
leucine-rich repeat 112..135 CDD:275380 8/22 (36%)
leucine-rich repeat 136..159 CDD:275380 8/22 (36%)
leucine-rich repeat 160..183 CDD:275380 9/22 (41%)
leucine-rich repeat 184..207 CDD:275380 8/22 (36%)
leucine-rich repeat 208..231 CDD:275380 7/22 (32%)
leucine-rich repeat 232..255 CDD:275380 6/23 (26%)
leucine-rich repeat 256..279 CDD:275380 8/22 (36%)
leucine-rich repeat 304..316 CDD:275378 3/11 (27%)

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