DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and caps

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001303391.1 Gene:caps / 39493 FlyBaseID:FBgn0023095 Length:811 Species:Drosophila melanogaster


Alignment Length:457 Identity:130/457 - (28%)
Similarity:198/457 - (43%) Gaps:104/457 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 CICTVK------------KNGLDILCE-TTDLAHITKSMGTLKGKSPIIFYLKLRHNNLPKLQGF 99
            |:|.|.            .||    || ..|...:....|||              :.||     
  Fly    26 CLCLVLATLPVALGLANCPNG----CECDDDTLMVNCGEGTL--------------DVLP----- 67

  Fly   100 VFLALD--IRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNH 162
              :||:  |:.|.|.|:.|..|:.:  ....|.||.||:|.|.|.|:|.::..:...|..|:|:|
  Fly    68 --IALNPAIQRLVIKNNKLKTIDSS--MQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDH 128

  Fly   163 NKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILST 227
            |||..:.|..|.||.|:.:|.|..|.|.:::...|..:. .:..||||.|.:::|...||..|..
  Fly   129 NKIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMV-KLAELNLGQNRISHIDPHALDGLDN 192

  Fly   228 LKKLEIQENKIRTI-SEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDK 291
            |:.|.:.:|.:.|: .|..|:.|.||..|.|..|...|:|...|..|..|..|:|.|..:..|..
  Fly   193 LRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISG 257

  Fly   292 DAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFGD-------- 348
            ||.||| .:|::|.|.||::..||:.|.:.|.||..|::..|:..|::..||:|..:        
  Fly   258 DALKGL-VSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTG 321

  Fly   349 ----------------SLTFLNLQKN-DIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEPVI 396
                            :|..|||..| .:..|.|:....|..|.|:.|:.|:|..:.:.:: |..
  Fly   322 AQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLV-PWA 385

  Fly   397 DTLRIIDITDNPLNCSCELTW--------------------FPKLLEDLKNKDDEMSQKKKPLCH 441
            | |:.:|:::||..|.|.|.|                    :|..|.||            ||.|
  Fly   386 D-LQTLDLSENPFECDCRLLWLRHLLVSRNASGQYAPVICAYPTALRDL------------PLAH 437

  Fly   442 MS 443
            ::
  Fly   438 LA 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 3/19 (16%)
LRR_RI 93..384 CDD:238064 101/318 (32%)
leucine-rich repeat 107..129 CDD:275380 5/21 (24%)
leucine-rich repeat 131..154 CDD:275380 9/22 (41%)
LRR_8 154..214 CDD:290566 22/59 (37%)
leucine-rich repeat 155..178 CDD:275380 11/22 (50%)
leucine-rich repeat 179..203 CDD:275380 5/23 (22%)
leucine-rich repeat 204..227 CDD:275380 9/22 (41%)
LRR_8 226..286 CDD:290566 20/60 (33%)
leucine-rich repeat 228..251 CDD:275380 7/23 (30%)
leucine-rich repeat 252..275 CDD:275380 8/22 (36%)
LRR_8 276..335 CDD:290566 23/58 (40%)
leucine-rich repeat 276..300 CDD:275380 10/23 (43%)
leucine-rich repeat 301..324 CDD:275380 9/22 (41%)
leucine-rich repeat 325..349 CDD:275380 7/47 (15%)
LRR_8 349..409 CDD:290566 18/60 (30%)
leucine-rich repeat 350..373 CDD:275380 8/23 (35%)
capsNP_001303391.1 leucine-rich repeat 75..96 CDD:275380 5/22 (23%)
LRR_8 96..155 CDD:290566 24/58 (41%)
leucine-rich repeat 97..120 CDD:275380 9/22 (41%)
leucine-rich repeat 121..144 CDD:275380 11/22 (50%)
LRR_8 143..201 CDD:290566 17/58 (29%)
leucine-rich repeat 145..168 CDD:275380 5/23 (22%)
LRR_RI 147..397 CDD:238064 75/253 (30%)
leucine-rich repeat 169..192 CDD:275380 9/22 (41%)
leucine-rich repeat 193..217 CDD:275380 7/23 (30%)
LRR_8 217..276 CDD:290566 24/59 (41%)
leucine-rich repeat 218..241 CDD:275380 8/22 (36%)
leucine-rich repeat 242..265 CDD:275380 10/23 (43%)
LRR_8 265..321 CDD:290566 17/55 (31%)
leucine-rich repeat 266..289 CDD:275380 9/22 (41%)
leucine-rich repeat 290..313 CDD:275380 7/22 (32%)
LRR_8 312..374 CDD:290566 12/61 (20%)
leucine-rich repeat 314..335 CDD:275380 0/20 (0%)
leucine-rich repeat 339..363 CDD:275380 8/23 (35%)
LRRCT 395..445 CDD:214507 13/57 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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