DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and CG5819

DIOPT Version :10

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_611660.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster


Alignment Length:583 Identity:131/583 - (22%)
Similarity:214/583 - (36%) Gaps:154/583 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VVLLLQVLVMDQVLGQGPPQTQVCPEQSEIAPCICTVKKNGLDILCETTDLAHITKSMGTLKGKS 80
            :||.|.:||:..:   ...:...||     .||.||...:.|...|....|.......|      
  Fly     3 IVLELALLVLGVI---SSCRAVNCP-----WPCRCTWVVDSLYADCSRRSLQTYPNFDG------ 53

  Fly    81 PIIFYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGA----GLTQLDVSLNQM 141
                 :.:.|.:   |.|..||.....:..|.:.....:..|.:||:||    |.|.|...|...
  Fly    54 -----IPVEHLD---LSGNKFLEFPTLYADIDSLIYLDLSSNYISSIGAKTLIGFTSLRTLLLAN 110

  Fly   142 KTV-------PSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILT--------LYENKITQ 191
            .::       |::|.::...|..|.|:.|::     .:|...|:.|:||        |....|:.
  Fly   111 NSIDSWESLSPNEAFKYAPSLKRLGLDGNRL-----GSFGNGESFELLTSSSLTDLGLSSCGISS 170

  Fly   192 IDPEAFRGLEDHIKRLNLGGNDLTNI---PQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLD 253
            |..:.......:::||||..|.|..|   |.:      ||:.|::....|:.:|....:.:|:|:
  Fly   171 IGGDQMVNQLPNLERLNLANNQLAQIAALPSR------TLRVLDLSNCSIKNLSGFFLDAMQNLE 229

  Fly   254 SLILAHN----------------MITTVPANV-------FSHLTLLNSLELEGNKISVIDKDAFK 295
            :|.|:.|                |:..:..:.       .|.|..|..:.|:||.:.|:|.:.|.
  Fly   230 ALNLSRNTELQFDSLSEDPILTYMLRKLDVSYCNLDSIELSGLPQLTEVRLQGNLLRVVDVNTFA 294

  Fly   296 GLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDI 360
            . ...|:.:.|..|.:..|..:|...|.||:.|:|..|.|..|..: |....|.|..|||.:|.:
  Fly   295 N-NSMLEVVDLSQNVLRHIGQDAFAKLKRLKELNLAFNEIARLDRN-FIRNNDVLVELNLSRNVL 357

  Fly   361 KVLPSLLFENLNSLETLNLQNNKLQRIPQDIME--PVIDTLRIID--ITDNP----------LN- 410
            :.|..::   .||:.|:|:...::..|....:.  .||..|.:.:  |||.|          || 
  Fly   358 QKLTKIV---SNSVRTINMSWCEITSIESTALSSLSVIQKLDLSNNLITDMPTFMRSETLQQLNL 419

  Fly   411 CSCELTW--------FPKLLEDLKNKDDEMSQKKKPL---------------------CHMSL-- 444
            .:|.||.        ||: |.||....:.::....|.                     ||..|  
  Fly   420 ANCRLTTVRNNTFREFPE-LADLHLNGNRLTSPIPPNYFDGNKFLDQLWLGDNPWICDCHSPLFV 483

  Fly   445 DNREYFVQAMPTE-----KMHCAG------------------LNVSPSPTSGGLMRILQVNIL 484
            |..:| :.|.|.:     .:.||.                  ||...|.|......|:.:.:|
  Fly   484 DFYDY-LTAKPAKIKDRNHLRCAAPAVFYGKLWEFACADVWILNARTSSTGEKAWSIIMLTLL 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 5/19 (26%)
leucine-rich repeat 107..129 CDD:275380 4/21 (19%)
LRR <131..410 CDD:443914 78/333 (23%)
leucine-rich repeat 131..154 CDD:275380 5/29 (17%)
leucine-rich repeat 155..178 CDD:275380 5/22 (23%)
leucine-rich repeat 179..203 CDD:275380 6/31 (19%)
leucine-rich repeat 204..227 CDD:275380 8/25 (32%)
leucine-rich repeat 228..251 CDD:275380 4/22 (18%)
leucine-rich repeat 252..275 CDD:275380 7/45 (16%)
leucine-rich repeat 276..300 CDD:275380 7/23 (30%)
leucine-rich repeat 301..324 CDD:275380 6/22 (27%)
leucine-rich repeat 325..349 CDD:275380 7/23 (30%)
leucine-rich repeat 350..373 CDD:275380 6/22 (27%)
CG5819NP_611660.1 RNA1 <56..193 CDD:444072 34/144 (24%)
leucine-rich repeat 56..78 CDD:275380 6/24 (25%)
leucine-rich repeat 79..102 CDD:275380 6/22 (27%)
leucine-rich repeat 103..130 CDD:275380 4/26 (15%)
leucine-rich repeat 131..155 CDD:275380 8/28 (29%)
LRR 134..>466 CDD:443914 83/348 (24%)
leucine-rich repeat 158..182 CDD:275380 3/23 (13%)
leucine-rich repeat 204..227 CDD:275380 4/22 (18%)
leucine-rich repeat 254..274 CDD:275380 2/19 (11%)
leucine-rich repeat 275..298 CDD:275380 7/23 (30%)
leucine-rich repeat 299..322 CDD:275380 6/22 (27%)
leucine-rich repeat 323..346 CDD:275380 7/23 (30%)
leucine-rich repeat 347..391 CDD:275380 11/46 (24%)
leucine-rich repeat 392..413 CDD:275380 6/20 (30%)
leucine-rich repeat 414..437 CDD:275380 6/22 (27%)
LRRCT 471..517 CDD:214507 9/46 (20%)

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