DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and Lrfn1

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001121166.1 Gene:Lrfn1 / 365222 RGDID:1304707 Length:766 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380
LRR_RI 93..384 CDD:238064
leucine-rich repeat 107..129 CDD:275380
leucine-rich repeat 131..154 CDD:275380
LRR_8 154..214 CDD:290566
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..203 CDD:275380
leucine-rich repeat 204..227 CDD:275380
LRR_8 226..286 CDD:290566
leucine-rich repeat 228..251 CDD:275380
leucine-rich repeat 252..275 CDD:275380
LRR_8 276..335 CDD:290566
leucine-rich repeat 276..300 CDD:275380
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..349 CDD:275380
LRR_8 349..409 CDD:290566
leucine-rich repeat 350..373 CDD:275380
Lrfn1NP_001121166.1 LRR 1 66..87
leucine-rich repeat 67..90 CDD:275380
PPP1R42 70..226 CDD:411060
LRR 2 90..111
leucine-rich repeat 91..114 CDD:275380
LRR 3 114..135
leucine-rich repeat 115..138 CDD:275380
LRR 4 138..159
leucine-rich repeat 139..163 CDD:275380
LRR 5 163..184
leucine-rich repeat 164..187 CDD:275380
LRR 6 187..208
leucine-rich repeat 188..211 CDD:275380
LRR 7 211..232
leucine-rich repeat 212..230 CDD:275380
LRRCT 252..>284 CDD:214507
Ig 299..387 CDD:416386
Ig strand A 299..302 CDD:409353
Ig strand A' 306..310 CDD:409353
Ig strand B 316..324 CDD:409353
Ig strand C 330..335 CDD:409353
Ig strand C' 338..340 CDD:409353
Ig strand D 346..350 CDD:409353
Ig strand E 353..357 CDD:409353
Ig strand F 367..374 CDD:409353
Ig strand G 377..387 CDD:409353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..422
FN3 426..500 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 568..601
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 646..742
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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