DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and haf

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001356954.1 Gene:haf / 33339 FlyBaseID:FBgn0261509 Length:1347 Species:Drosophila melanogaster


Alignment Length:476 Identity:127/476 - (26%)
Similarity:207/476 - (43%) Gaps:80/476 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VLVMDQVLGQGPPQTQVCPEQSEI----APCICTVK-KNGLDILCETTDLAHITKSMGTLKGKSP 81
            :|::..:||:.......||.|.::    ..|||... ...|.:.|:..|.:.:..:|.|.....|
  Fly    18 LLLLPLILGRLHVAHAQCPWQRDVPDLQTSCICAYNLGRELSVQCDQVDFSQLLAAMNTHARLKP 82

  Fly    82 IIFYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPS 146
            :.. |.:.::.:.:|...||..|.:.:|.:.:..:..|...|.....:.|..|::..|.:..||.
  Fly    83 VDL-LYVNNSTISELPDAVFSNLSLHNLQLSSCGIQRIATGAFKGQESVLRNLNLQDNLLADVPV 146

  Fly   147 QALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGG 211
            :||:.|..|.:|:|:.|:::.|.::||.||..|..|.|.:|.:| :...||||||..:|.|||.|
  Fly   147 EALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNNVT-LASNAFRGLEQSLKNLNLKG 210

  Fly   212 NDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPA----NVFSH 272
            .....:|:                         ...||:||..|.|:.|.|..:|.    .||..
  Fly   211 TKQRKVPE-------------------------SIRGLKSLAFLDLSQNGIKELPGAGGIRVFDG 250

  Fly   273 LTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINV 337
            |..|.:|.||.|.|..|.:.||.|:.:.|..|.|.:|.:...|..|:..|..||.||:..|.:..
  Fly   251 LDALTALNLERNLIQSIGETAFAGVRKTLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTS 315

  Fly   338 LAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEPVIDTLRII 402
            |.|.||.| ...:|.|.|..|.:..:|...|.:||:                        |||.:
  Fly   316 LPEAAFRG-NPGITLLALDGNPLSSVPEGAFAHLNA------------------------TLRGL 355

  Fly   403 DITDNPLNCSCELTWFPKLLEDLKNKDDEM-SQKKKP-LCHMSLDNREYFVQAMPTEKMHC---- 461
            .:....|:|.|:|.|   :.|.::|.|.:: |:::.| .|......|:....::..|::.|    
  Fly   356 SLGGRFLHCDCKLRW---VAEWIRNGDLQVTSRERNPQFCGTPPRFRDRGFYSIQPEELSCPDIA 417

  Fly   462 -------AGL--NVSPS-PTS 472
                   .||  |:.|: |:|
  Fly   418 DAALRGPVGLADNLKPTLPSS 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 4/19 (21%)
LRR_RI 93..384 CDD:238064 88/294 (30%)
leucine-rich repeat 107..129 CDD:275380 3/21 (14%)
leucine-rich repeat 131..154 CDD:275380 8/22 (36%)
LRR_8 154..214 CDD:290566 25/59 (42%)
leucine-rich repeat 155..178 CDD:275380 9/22 (41%)
leucine-rich repeat 179..203 CDD:275380 11/23 (48%)
leucine-rich repeat 204..227 CDD:275380 6/22 (27%)
LRR_8 226..286 CDD:290566 17/63 (27%)
leucine-rich repeat 228..251 CDD:275380 2/22 (9%)
leucine-rich repeat 252..275 CDD:275380 9/26 (35%)
LRR_8 276..335 CDD:290566 22/58 (38%)
leucine-rich repeat 276..300 CDD:275380 10/23 (43%)
leucine-rich repeat 301..324 CDD:275380 7/22 (32%)
leucine-rich repeat 325..349 CDD:275380 10/23 (43%)
LRR_8 349..409 CDD:290566 11/59 (19%)
leucine-rich repeat 350..373 CDD:275380 7/22 (32%)
hafNP_001356954.1 LRR <52..>252 CDD:227223 59/226 (26%)
leucine-rich repeat 86..105 CDD:275380 4/18 (22%)
leucine-rich repeat 106..129 CDD:275380 3/22 (14%)
LRR_8 131..189 CDD:338972 21/57 (37%)
leucine-rich repeat 131..154 CDD:275380 8/22 (36%)
leucine-rich repeat 155..178 CDD:275380 9/22 (41%)
leucine-rich repeat 179..202 CDD:275380 11/23 (48%)
leucine-rich repeat 203..225 CDD:275380 8/46 (17%)
leucine-rich repeat 226..253 CDD:275380 9/26 (35%)
LRR_8 254..337 CDD:338972 31/83 (37%)
leucine-rich repeat 254..302 CDD:275380 17/47 (36%)
leucine-rich repeat 303..326 CDD:275380 10/23 (43%)
leucine-rich repeat 327..350 CDD:275380 7/22 (32%)
PCC 332..>413 CDD:188093 22/107 (21%)
PRK10927 <1061..>1097 CDD:236797
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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