DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and Lrfn3

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001100972.1 Gene:Lrfn3 / 308495 RGDID:1305567 Length:626 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380
LRR_RI 93..384 CDD:238064
leucine-rich repeat 107..129 CDD:275380
leucine-rich repeat 131..154 CDD:275380
LRR_8 154..214 CDD:290566
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..203 CDD:275380
leucine-rich repeat 204..227 CDD:275380
LRR_8 226..286 CDD:290566
leucine-rich repeat 228..251 CDD:275380
leucine-rich repeat 252..275 CDD:275380
LRR_8 276..335 CDD:290566
leucine-rich repeat 276..300 CDD:275380
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..349 CDD:275380
LRR_8 349..409 CDD:290566
leucine-rich repeat 350..373 CDD:275380
Lrfn3NP_001100972.1 LRR <63..>222 CDD:227223
leucine-rich repeat 63..84 CDD:275380
LRR 1 84..105
leucine-rich repeat 85..108 CDD:275380
LRR 2 108..129
leucine-rich repeat 109..132 CDD:275380
LRR 3 132..153
leucine-rich repeat 133..157 CDD:275380
LRR 4 157..178
leucine-rich repeat 158..181 CDD:275380
LRR 5 181..202
leucine-rich repeat 182..205 CDD:275380
LRR 6 205..226
leucine-rich repeat 206..230 CDD:275380
leucine-rich repeat 242..253 CDD:275378
TPKR_C2 249..>281 CDD:417692
Ig 296..383 CDD:416386
Ig strand A 296..299 CDD:409353
Ig strand A' 303..306 CDD:409353
Ig strand B 312..320 CDD:409353
Ig strand C 326..331 CDD:409353
Ig strand C' 334..336 CDD:409353
Ig strand D 342..346 CDD:409353
Ig strand E 349..353 CDD:409353
Ig strand F 363..370 CDD:409353
Ig strand G 373..383 CDD:409353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..423
fn3 425..502 CDD:394996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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