DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and Lrrtm3

DIOPT Version :10

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001099857.1 Gene:Lrrtm3 / 294380 RGDID:1304866 Length:582 Species:Rattus norvegicus


Alignment Length:471 Identity:119/471 - (25%)
Similarity:189/471 - (40%) Gaps:128/471 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SGCTMVVTVVLLLQVLVMDQVLGQGPPQTQVCPEQSEIAPCICTVKKNGLDILCETTDLAHITKS 72
            |...:|:...:||.:|...:         :.||:     .|.|    .|..:.||:..|..|..|
  Rat    12 SAVAVVLAPTVLLTMLSSAE---------RGCPK-----GCRC----EGKMVYCESQKLQEIPSS 58

  Fly    73 M--GTLKGKSPIIFYLKLRHNNLPKLQGFVFLALD-IRHLTIHNSSLAAIEENALSSLGAGLTQL 134
            :  |.|.        |.||:|:|.||:...|..|: :..|.:.::.::.|:|||.:.:       
  Rat    59 ISAGCLG--------LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGI------- 108

  Fly   135 DVSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRG 199
                        :.|:.|.      |:.|:|:...||.|..:..|..|.|..|::..:..|.|||
  Rat   109 ------------RRLKELI------LSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRG 155

  Fly   200 LEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITT 264
            |. .:..|:|..|.|..||.:.......|:.|::..|:||:::...|.|:..|..|.|.||..:.
  Rat   156 LR-KLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSK 219

  Fly   265 VPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLD 329
            :...:|..|..|.:|.::.||||||                 |.....|..|        |:.||
  Rat   220 LNLALFPRLVSLQNLYMQWNKISVI-----------------GQTMSWTWSS--------LQRLD 259

  Fly   330 LRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEP 394
            |..|.|     :||:|                  || :|:.:.:|:.|||.:|||..|.|:|::.
  Rat   260 LSGNEI-----EAFSG------------------PS-VFQCVPNLQRLNLDSNKLTFIGQEILDS 300

  Fly   395 VIDTLRIIDITDNPLNCS---CEL-TWF---------------PKLLEDLKNKDDEMSQKKKPLC 440
            .| :|..|.:..|...||   |.| .|.               ||.|:.:...|   :.|...:|
  Rat   301 WI-SLNDISLAGNIWECSRNICSLVNWLKSFKGLRENTILCASPKELQGVNVID---AVKNYSIC 361

  Fly   441 HMSLDNREY-FVQAMP 455
            ..|.....: ..:|:|
  Rat   362 GKSTTTERFDLARALP 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 8/19 (42%)
leucine-rich repeat 107..129 CDD:275380 5/21 (24%)
LRR <131..410 CDD:443914 74/278 (27%)
leucine-rich repeat 131..154 CDD:275380 2/22 (9%)
leucine-rich repeat 155..178 CDD:275380 6/22 (27%)
leucine-rich repeat 179..203 CDD:275380 9/23 (39%)
leucine-rich repeat 204..227 CDD:275380 6/22 (27%)
leucine-rich repeat 228..251 CDD:275380 7/22 (32%)
leucine-rich repeat 252..275 CDD:275380 7/22 (32%)
leucine-rich repeat 276..300 CDD:275380 8/23 (35%)
leucine-rich repeat 301..324 CDD:275380 3/22 (14%)
leucine-rich repeat 325..349 CDD:275380 9/23 (39%)
leucine-rich repeat 350..373 CDD:275380 3/22 (14%)
Lrrtm3NP_001099857.1 LRRNT 33..61 CDD:214470 10/36 (28%)
LRR 59..339 CDD:443914 95/363 (26%)
LRR 1 61..83 10/29 (34%)
leucine-rich repeat 66..86 CDD:275380 9/19 (47%)
LRR 2 84..107 6/22 (27%)
leucine-rich repeat 87..110 CDD:275380 5/41 (12%)
LRR 3 109..131 8/27 (30%)
leucine-rich repeat 111..134 CDD:275380 8/28 (29%)
LRR 4 132..155 6/22 (27%)
leucine-rich repeat 135..158 CDD:275380 9/23 (39%)
LRR 5 156..179 7/23 (30%)
leucine-rich repeat 159..182 CDD:275380 6/22 (27%)
LRR 6 181..203 6/21 (29%)
leucine-rich repeat 183..206 CDD:275380 7/22 (32%)
LRR 7 205..227 6/21 (29%)
leucine-rich repeat 207..230 CDD:275380 7/22 (32%)
LRR 8 229..251 9/38 (24%)
leucine-rich repeat 231..254 CDD:275380 10/39 (26%)
LRR 9 252..276 13/55 (24%)
leucine-rich repeat 255..279 CDD:275380 12/47 (26%)
LRR 10 277..300 10/22 (45%)
leucine-rich repeat 280..300 CDD:275380 10/19 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..411 119/471 (25%)

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