DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and Slitrk2

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001154903.1 Gene:Slitrk2 / 245450 MGIID:2679449 Length:846 Species:Mus musculus


Alignment Length:618 Identity:123/618 - (19%)
Similarity:178/618 - (28%) Gaps:303/618 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VLLLQVLVMDQVLGQGPPQTQVCPEQSEIAP--CICTVKKNGLDILCETTDLAHITKSMGTLKGK 79
            |..|.||.:..:|     ||:......:|..  |:|..|:|.|:|.||.                
Mouse     5 VWFLSVLTVAGIL-----QTESRKTAKDICKIRCLCEEKENVLNINCEN---------------- 48

  Fly    80 SPIIFYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTV 144
                             :||.                                  .|||.|   .
Mouse    49 -----------------KGFT----------------------------------TVSLLQ---P 59

  Fly   145 PSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNL 209
            |...:..||      ||.|.:|.::.|.|........|.|..|.:.:|.|.||.||:. :|||:|
Mouse    60 PQYRIYQLF------LNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKT-LKRLHL 117

  Fly   210 GGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLT 274
            ..|.|..:.:.....|.:|:.|:...|.|.||..|.|..|..|..|||..|::.::|:||| ...
Mouse   118 NNNKLEVLREDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVF-RFV 181

  Fly   275 LLNSLELEGNKISVI-------------------------------------------------- 289
            ||..|:|.||::.|:                                                  
Mouse   182 LLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETP 246

  Fly   290 ----------------------------------------------------------------- 289
                                                                             
Mouse   247 FRLHGKDVTQLTRQDLCPRKSASGDSSQRSSHSDTHVQRLTPTTNPALNPTRAPKASRPPKMRNR 311

  Fly   290 ---------DKDAF----------------------------KGLEEN----------------- 300
                     |:.:|                            .||..|                 
Mouse   312 PTPRVTVSKDRQSFGPIMVYQTKSPVALTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPT 376

  Fly   301 --------------------LQY-----LRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAE 340
                                |:|     |.||:|:|..|...|...|..||.|.|..|.:.||..
Mouse   377 SPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYP 441

  Fly   341 DAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDI-------------- 391
            ..|.|. .||.:|.|:.|.||.:..|.|:.|.:|:.|.|.||.|:.:|.:|              
Mouse   442 SMFDGL-QSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNN 505

  Fly   392 ------MEPVIDTLRI---IDITDNPLNCSCEL 415
                  ::.|:|.|..   ||:.:||.:|:|::
Mouse   506 HFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDI 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 2/19 (11%)
LRR_RI 93..384 CDD:238064 95/484 (20%)
leucine-rich repeat 107..129 CDD:275380 0/21 (0%)
leucine-rich repeat 131..154 CDD:275380 6/22 (27%)
LRR_8 154..214 CDD:290566 20/59 (34%)
leucine-rich repeat 155..178 CDD:275380 6/22 (27%)
leucine-rich repeat 179..203 CDD:275380 9/23 (39%)
leucine-rich repeat 204..227 CDD:275380 7/22 (32%)
LRR_8 226..286 CDD:290566 24/59 (41%)
leucine-rich repeat 228..251 CDD:275380 9/22 (41%)
leucine-rich repeat 252..275 CDD:275380 9/22 (41%)
LRR_8 276..335 CDD:290566 26/252 (10%)
leucine-rich repeat 276..300 CDD:275380 10/175 (6%)
leucine-rich repeat 301..324 CDD:275380 10/27 (37%)
leucine-rich repeat 325..349 CDD:275380 9/23 (39%)
LRR_8 349..409 CDD:290566 24/82 (29%)
leucine-rich repeat 350..373 CDD:275380 9/22 (41%)
Slitrk2NP_001154903.1 LRR 1 63..84 8/26 (31%)
leucine-rich repeat 67..87 CDD:275378 8/25 (32%)
LRR_8 86..146 CDD:404697 19/60 (32%)
LRR 2 87..108 7/20 (35%)
leucine-rich repeat 88..111 CDD:275378 9/22 (41%)
LRR 3 111..132 6/21 (29%)
leucine-rich repeat 112..135 CDD:275378 7/22 (32%)
LRR_8 135..193 CDD:404697 24/58 (41%)
LRR 4 135..156 8/20 (40%)
leucine-rich repeat 136..159 CDD:275378 9/22 (41%)
LRR 5 159..180 9/21 (43%)
leucine-rich repeat 160..173 CDD:275378 5/12 (42%)
Required for interaction with PTPRD. /evidence=ECO:0000269|PubMed:25989451 167..215 12/48 (25%)
leucine-rich repeat 208..370 CDD:275380 5/161 (3%)
TPKR_C2 216..>252 CDD:417692 0/35 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..322 0/60 (0%)
PPP1R42 358..531 CDD:411060 43/173 (25%)
leucine-rich repeat 371..401 CDD:275380 2/29 (7%)
LRR 7 377..398 0/20 (0%)
LRR_8 400..460 CDD:404697 22/60 (37%)
LRR 8 401..422 7/20 (35%)
leucine-rich repeat 402..425 CDD:275380 8/22 (36%)
LRR 9 425..446 8/20 (40%)
leucine-rich repeat 426..449 CDD:275380 9/23 (39%)
LRR 10 449..470 9/20 (45%)
leucine-rich repeat 450..469 CDD:275380 7/18 (39%)
LRR 11 473..494 8/20 (40%)
leucine-rich repeat 474..492 CDD:275380 7/17 (41%)
LRR 12 496..517 1/20 (5%)
leucine-rich repeat 497..510 CDD:275378 0/12 (0%)
leucine-rich repeat 522..534 CDD:275378 4/11 (36%)
LRRCT 530..580 CDD:214507 4/9 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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