DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and LRRC55

DIOPT Version :10

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001005210.2 Gene:LRRC55 / 219527 HGNCID:32324 Length:298 Species:Homo sapiens


Alignment Length:170 Identity:47/170 - (27%)
Similarity:76/170 - (44%) Gaps:16/170 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PCICTVKKNGLDILCETTDLAHITKS--MGTLKGKSPIIFYLKLRHNNLPKL-QGFVFLALDIRH 108
            |.:||.:...:|  |.:..|..:...  |.|..        |.|.||.:..: .|::...::::.
Human    39 PVLCTCRNQVVD--CSSQRLFSVPPDLPMDTRN--------LSLAHNRITAVPPGYLTCYMELQV 93

  Fly   109 LTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNK-ITVIHNNA 172
            |.:||:||..: ...|......|..||:|.|....||:...|....|:.::|:||. :..:|..|
Human    94 LDLHNNSLMEL-PRGLFLHAKRLAHLDLSYNNFSHVPADMFQEAHGLVHIDLSHNPWLRRVHPQA 157

  Fly   173 FEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGN 212
            |:||..|..|.|....:..:..||..||.. :..|.:|||
Human   158 FQGLMQLRDLDLSYGGLAFLSLEALEGLPG-LVTLQIGGN 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 5/20 (25%)
leucine-rich repeat 107..129 CDD:275380 6/21 (29%)
LRR <131..410 CDD:443914 28/83 (34%)
leucine-rich repeat 131..154 CDD:275380 8/22 (36%)
leucine-rich repeat 155..178 CDD:275380 9/23 (39%)
leucine-rich repeat 179..203 CDD:275380 7/23 (30%)
leucine-rich repeat 204..227 CDD:275380 4/9 (44%)
leucine-rich repeat 228..251 CDD:275380
leucine-rich repeat 252..275 CDD:275380
leucine-rich repeat 276..300 CDD:275380
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..349 CDD:275380
leucine-rich repeat 350..373 CDD:275380
LRRC55NP_001005210.2 LRR <47..>196 CDD:443914 42/160 (26%)
leucine-rich repeat 47..66 CDD:275380 3/20 (15%)
LRR 1 66..87 6/28 (21%)
leucine-rich repeat 67..90 CDD:275380 6/30 (20%)
LRR 2 90..111 6/21 (29%)
leucine-rich repeat 91..114 CDD:275380 6/23 (26%)
LRR 3 114..135 7/20 (35%)
leucine-rich repeat 115..138 CDD:275380 8/22 (36%)
LRR 4 138..160 7/21 (33%)
leucine-rich repeat 139..163 CDD:275380 9/23 (39%)
LRR 5 163..186 6/22 (27%)
leucine-rich repeat 164..187 CDD:275380 7/22 (32%)
LRRCT 196..247 CDD:214507 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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