DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14762 and Slit2

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001278156.1 Gene:Slit2 / 20563 MGIID:1315205 Length:1542 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380
LRR_RI 93..384 CDD:238064
leucine-rich repeat 107..129 CDD:275380
leucine-rich repeat 131..154 CDD:275380
LRR_8 154..214 CDD:290566
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..203 CDD:275380
leucine-rich repeat 204..227 CDD:275380
LRR_8 226..286 CDD:290566
leucine-rich repeat 228..251 CDD:275380
leucine-rich repeat 252..275 CDD:275380
LRR_8 276..335 CDD:290566
leucine-rich repeat 276..300 CDD:275380
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..349 CDD:275380
LRR_8 349..409 CDD:290566
leucine-rich repeat 350..373 CDD:275380
Slit2NP_001278156.1 LRRNT 27..58 CDD:214470
leucine-rich repeat 38..56 CDD:275380
LRR_8 55..115 CDD:290566
LRR 1 56..77
leucine-rich repeat 57..80 CDD:275380
LRR_4 58..95 CDD:289563
LRR 2 80..101
LRR_RI <81..214 CDD:238064
leucine-rich repeat 81..104 CDD:275380
LRR 3 104..125
leucine-rich repeat 105..128 CDD:275380
LRR 4 128..149
leucine-rich repeat 129..152 CDD:275380
LRR 5 152..173
leucine-rich repeat 153..176 CDD:275380
LRR_8 154..211 CDD:290566
LRR 6 176..197
leucine-rich repeat 177..200 CDD:275380
leucine-rich repeat 201..329 CDD:275380
LRRCT 209..258 CDD:214507
LRRNT 276..308 CDD:214470
LRR 7 305..326
LRR_8 307..364 CDD:290566
LRR_4 328..368 CDD:289563
LRR 8 329..350
leucine-rich repeat 330..353 CDD:275380
LRR 9 353..374
leucine-rich repeat 354..374 CDD:275380
LRR 10 377..398
leucine-rich repeat 378..401 CDD:275380
LRR_8 384..436 CDD:290566
LRR_RI <394..650 CDD:238064
LRR 11 401..422
leucine-rich repeat 402..423 CDD:275380
leucine-rich repeat 426..527 CDD:275380
TPKR_C2 434..>464 CDD:301599
LRR 12 538..559
LRR_4 541..579 CDD:289563
leucine-rich repeat 541..563 CDD:275380
LRR_8 562..622 CDD:290566
LRR 13 563..584
leucine-rich repeat 564..587 CDD:275380
LRR 14 587..608
leucine-rich repeat 588..611 CDD:275380
LRR_8 611..670 CDD:290566
LRR 15 611..632
leucine-rich repeat 612..635 CDD:275380
LRR 16 635..656
leucine-rich repeat 636..659 CDD:275380
leucine-rich repeat 660..751 CDD:275380
LRRCT 668..717 CDD:214507
LRRNT 731..762 CDD:214470
leucine-rich repeat 752..782 CDD:275380
LRR 17 759..781
LRR_8 781..841 CDD:290566
LRR_4 781..822 CDD:289563
LRR 18 782..803
leucine-rich repeat 783..806 CDD:275380
LRR 19 806..827
leucine-rich repeat 807..830 CDD:275380
LRR 20 830..851
leucine-rich repeat 831..852 CDD:275380
LRRCT 863..912 CDD:214507
EGF_CA 924..958 CDD:238011
EGF_CA <968..1000 CDD:238011
EGF_CA 1002..1033 CDD:214542
EGF_CA 1051..1086 CDD:238011
EGF_CA 1089..1125 CDD:238011
LamG 1196..1329 CDD:214598
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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