DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14762 and Slit1

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_056563.2 Gene:Slit1 / 20562 MGIID:1315203 Length:1531 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380
LRR_RI 93..384 CDD:238064
leucine-rich repeat 107..129 CDD:275380
leucine-rich repeat 131..154 CDD:275380
LRR_8 154..214 CDD:290566
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..203 CDD:275380
leucine-rich repeat 204..227 CDD:275380
LRR_8 226..286 CDD:290566
leucine-rich repeat 228..251 CDD:275380
leucine-rich repeat 252..275 CDD:275380
LRR_8 276..335 CDD:290566
leucine-rich repeat 276..300 CDD:275380
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..349 CDD:275380
LRR_8 349..409 CDD:290566
leucine-rich repeat 350..373 CDD:275380
Slit1NP_056563.2 LRRNT 33..64 CDD:214470
leucine-rich repeat 43..62 CDD:275380
LRR <62..>219 CDD:227223
LRR 1 62..83
leucine-rich repeat 63..86 CDD:275380
LRR 2 86..107
leucine-rich repeat 87..110 CDD:275380
LRR 3 110..131
leucine-rich repeat 111..134 CDD:275380
LRR 4 134..155
leucine-rich repeat 135..158 CDD:275380
LRR 5 158..179
LRR_8 159..217 CDD:338972
leucine-rich repeat 159..182 CDD:275380
LRR 6 182..203
leucine-rich repeat 183..206 CDD:275380
PCC 188..>328 CDD:188093
leucine-rich repeat 207..334 CDD:275380
LRR 7 310..331
internalin_A 311..>682 CDD:380193
LRR 8 334..355
leucine-rich repeat 335..358 CDD:275380
LRR 9 358..379
leucine-rich repeat 359..379 CDD:275380
LRR 10 382..403
leucine-rich repeat 383..406 CDD:275380
LRR 11 406..427
leucine-rich repeat 407..428 CDD:275380
leucine-rich repeat 431..528 CDD:275380
leucine-rich repeat 529..566 CDD:275380
LRR 12 541..562
LRR 13 566..587
leucine-rich repeat 567..590 CDD:275380
LRR 14 590..611
leucine-rich repeat 591..614 CDD:275380
LRR 15 614..635
leucine-rich repeat 615..638 CDD:275380
LRR 16 638..659
leucine-rich repeat 639..660 CDD:275380
PCC 644..>730 CDD:188093
leucine-rich repeat 663..754 CDD:275380
LRRNT 733..765 CDD:214470
leucine-rich repeat 755..785 CDD:275380
LRR_8 762..820 CDD:338972
LRR 17 762..783
LRR 18 785..806
leucine-rich repeat 786..809 CDD:275380
LRR 19 809..830
leucine-rich repeat 810..830 CDD:275380
LRR 20 833..854
leucine-rich repeat 834..857 CDD:275380
PCC 842..>1002 CDD:188093
EGF_CA 1005..1041 CDD:238011
EGF_CA 1044..1080 CDD:238011
EGF_CA 1085..1119 CDD:238011
LamG 1186..1319 CDD:214598
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.