DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and sym-1

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_510426.1 Gene:sym-1 / 181555 WormBaseID:WBGene00006366 Length:680 Species:Caenorhabditis elegans


Alignment Length:440 Identity:117/440 - (26%)
Similarity:194/440 - (44%) Gaps:56/440 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LLLQVLVMDQVLGQGPPQTQVCPE--QSEIAPCICTVKKNGLDILCETTDLAHITKSMGTLKGKS 80
            :||::.|...||   |.....||:  |::.| |.|.....|..|.|...|...:.:.:.|.....
 Worm     1 MLLRLCVALLVL---PACLAFCPKLFQNQTA-CSCDSTVEGPVIKCSGHDGLRMVEKLSTTTTME 61

  Fly    81 PIIFYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVP 145
              :..|.|.:.::.::....|..|.|:.|.:.|:.:..|.::|.:.|...:.:|.:|.|.:|.||
 Worm    62 --VRELALENADIIEVGPKAFKTLRIKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVP 124

  Fly   146 SQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLG 210
            :.||..|..|.||:|..|||..|...||..:.:|..:.|..|:|..:..:.|..::..::.|.|.
 Worm   125 TSALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQNLILD 189

  Fly   211 GNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTL 275
            .|.:|..|.||:..::.|..|.|:.|||..|.:.||..|.||..|.|..|.|:.:......:...
 Worm   190 NNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPN 254

  Fly   276 LNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAE 340
            |:.|.|..|.:..:|....:..:: ||.|.|..|....|..|....|..::||:|.:|.|:.:|.
 Worm   255 LHYLYLNENNLQTLDNGVLEQFKQ-LQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAP 318

  Fly   341 DAFTGF----------------------GDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNK 383
            .||.|.                      ...|..::|..|:|:.:..|.|::|.:|.||:|.|||
 Worm   319 GAFAGTPLLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIREVHELSFDHLPNLHTLDLANNK 383

  Fly   384 LQRI-------PQDIMEPVIDTLRIIDITDNPLNC---------SCELTW 417
            :..:       |:::         .:.:.:||:.|         |.|..|
 Worm   384 IMSLQNKSLSGPENL---------AVRLQENPVVCVKNGFHVLNSGEAIW 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 3/19 (16%)
LRR_RI 93..384 CDD:238064 90/312 (29%)
leucine-rich repeat 107..129 CDD:275380 5/21 (24%)
leucine-rich repeat 131..154 CDD:275380 9/22 (41%)
LRR_8 154..214 CDD:290566 18/59 (31%)
leucine-rich repeat 155..178 CDD:275380 10/22 (45%)
leucine-rich repeat 179..203 CDD:275380 5/23 (22%)
leucine-rich repeat 204..227 CDD:275380 7/22 (32%)
LRR_8 226..286 CDD:290566 20/59 (34%)
leucine-rich repeat 228..251 CDD:275380 10/22 (45%)
leucine-rich repeat 252..275 CDD:275380 5/22 (23%)
LRR_8 276..335 CDD:290566 17/58 (29%)
leucine-rich repeat 276..300 CDD:275380 5/23 (22%)
leucine-rich repeat 301..324 CDD:275380 8/22 (36%)
leucine-rich repeat 325..349 CDD:275380 9/45 (20%)
LRR_8 349..409 CDD:290566 16/66 (24%)
leucine-rich repeat 350..373 CDD:275380 7/22 (32%)
sym-1NP_510426.1 leucine-rich repeat 62..81 CDD:275380 2/18 (11%)
LRR_5 74..208 CDD:290045 39/133 (29%)
LRR_RI 81..384 CDD:238064 89/303 (29%)
leucine-rich repeat 86..108 CDD:275380 5/21 (24%)
leucine-rich repeat 110..133 CDD:275380 9/22 (41%)
leucine-rich repeat 134..157 CDD:275380 10/22 (45%)
leucine-rich repeat 158..182 CDD:275380 5/23 (22%)
LRR_8 182..241 CDD:290566 22/58 (38%)
leucine-rich repeat 183..206 CDD:275380 7/22 (32%)
leucine-rich repeat 207..230 CDD:275380 10/22 (45%)
leucine-rich repeat 231..254 CDD:275380 5/22 (23%)
LRR_8 253..313 CDD:290566 17/60 (28%)
leucine-rich repeat 255..278 CDD:275380 5/22 (23%)
leucine-rich repeat 279..302 CDD:275380 8/22 (36%)
LRR_8 302..384 CDD:290566 22/81 (27%)
leucine-rich repeat 303..323 CDD:275380 8/19 (42%)
leucine-rich repeat 350..373 CDD:275380 7/22 (32%)
leucine-rich repeat 374..394 CDD:275380 7/19 (37%)
leucine-rich repeat 399..410 CDD:275378 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 148 1.000 Inparanoid score I2985
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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