DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14762 and pan-1

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_497925.1 Gene:pan-1 / 175596 WormBaseID:WBGene00003915 Length:594 Species:Caenorhabditis elegans


Alignment Length:472 Identity:118/472 - (25%)
Similarity:191/472 - (40%) Gaps:124/472 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 CIC-------TVKKNGLDILCETTDLAHITKSMGTLKGKSPIIFYLKLRHNNLPKLQGFVFLALD 105
            |||       |||  |..|.||:..:|.:::::.:|.|..  :..|.:|.:.:..|...:|..:.
 Worm    43 CICADNGIFSTVK--GFTIECESASIASVSENLASLNGTE--LGRLTIRDSTVNVLPQDLFENVF 103

  Fly   106 IRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHN 170
            .:.:.:....|:.::.|:..||| |..:|                       |:|..|:|..:..
 Worm   104 AKQVKLERCGLSTLQPNSFQSLG-GSAEL-----------------------LSLRENRIKKLEK 144

  Fly   171 NAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQE 235
            ..|.||::|:.|.|..|||.:||..||..|: .::.|.|..||:..:.......:..||||.:|.
 Worm   145 GLFTGLKSLKTLDLAMNKIQEIDVGAFEELK-KVEELLLNENDIRVLKTGTFDGMKNLKKLTLQN 208

  Fly   236 NKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEEN 300
            ..:..|.:|.|.||.||:.|||::|.:..:...:||.|..|..|:|..||||.::..:|..||: 
 Worm   209 CNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKNLRVLDLGSNKISNVEMKSFPKLEK- 272

  Fly   301 LQYLRLGDNQIHTIPSEALRPL---------------------------HRLRHLDLRNNNINVL 338
               |.|.:|.|.::.|..|:.|                           .|:..|.|..||::.:
 Worm   273 ---LVLNNNTIDSMKSIKLKDLPSLVVALFDRNKIESIGDMDMFGLTRSDRIETLSLARNNLSQI 334

  Fly   339 AEDAFTGFGDSLTFLNLQKNDIKVL----PSLL----FENLNSLETLNLQNNKLQRIPQDIMEPV 395
            :..||....:.:|.| ||.|.|:.|    ||.:    ..:|..|.||.|.:|.|..|..|.:...
 Worm   335 SPKAFQHTPNLITLL-LQYNQIEELSSHSPSQVRTPFLASLKKLVTLQLSSNNLSVIRSDELPKS 398

  Fly   396 IDTLRI----------------------------------------------IDITDNPLNCSCE 414
            :.:|.:                                              :|::.||..|.|.
 Worm   399 LSSLALDHNVISKIEARALEGMEIKRLYLHSNKLNYLYQGTFDSFSPKSVEAVDVSLNPWVCVCN 463

  Fly   415 --LTWFPKLLEDLKNKD 429
              ..|.|:.||..:..|
 Worm   464 DPKEWLPRWLEASEEAD 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 4/19 (21%)
LRR_RI 93..384 CDD:238064 89/325 (27%)
leucine-rich repeat 107..129 CDD:275380 4/21 (19%)
leucine-rich repeat 131..154 CDD:275380 1/22 (5%)
LRR_8 154..214 CDD:290566 21/59 (36%)
leucine-rich repeat 155..178 CDD:275380 7/22 (32%)
leucine-rich repeat 179..203 CDD:275380 11/23 (48%)
leucine-rich repeat 204..227 CDD:275380 4/22 (18%)
LRR_8 226..286 CDD:290566 23/59 (39%)
leucine-rich repeat 228..251 CDD:275380 10/22 (45%)
leucine-rich repeat 252..275 CDD:275380 8/22 (36%)
LRR_8 276..335 CDD:290566 21/85 (25%)
leucine-rich repeat 276..300 CDD:275380 10/23 (43%)
leucine-rich repeat 301..324 CDD:275380 7/49 (14%)
leucine-rich repeat 325..349 CDD:275380 6/23 (26%)
LRR_8 349..409 CDD:290566 21/113 (19%)
leucine-rich repeat 350..373 CDD:275380 10/30 (33%)
pan-1NP_497925.1 leucine-rich repeat 130..152 CDD:275380 8/44 (18%)
LRR_8 132..187 CDD:290566 21/55 (38%)
leucine-rich repeat 153..176 CDD:275380 11/23 (48%)
leucine-rich repeat 177..200 CDD:275380 4/22 (18%)
LRR_8 199..259 CDD:290566 23/59 (39%)
leucine-rich repeat 201..224 CDD:275380 10/22 (45%)
LRR_RI 224..434 CDD:238064 52/214 (24%)
leucine-rich repeat 225..248 CDD:275380 8/22 (36%)
leucine-rich repeat 249..269 CDD:275380 8/19 (42%)
LRR_8 268..355 CDD:290566 21/91 (23%)
leucine-rich repeat 270..293 CDD:275380 9/26 (35%)
leucine-rich repeat 294..320 CDD:275380 0/25 (0%)
LRR_8 320..387 CDD:290566 22/67 (33%)
leucine-rich repeat 321..344 CDD:275380 6/22 (27%)
LRR_8 375..432 CDD:290566 9/56 (16%)
leucine-rich repeat 377..398 CDD:275380 8/20 (40%)
leucine-rich repeat 399..420 CDD:275380 1/20 (5%)
leucine-rich repeat 423..442 CDD:275380 0/18 (0%)
LRR_RI 80..326 CDD:238064 71/276 (26%)
leucine-rich repeat 81..104 CDD:275380 4/22 (18%)
leucine-rich repeat 105..128 CDD:275380 5/23 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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