DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14762 and Lrrn2

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_034862.1 Gene:Lrrn2 / 16980 MGIID:106037 Length:730 Species:Mus musculus


Alignment Length:522 Identity:128/522 - (24%)
Similarity:208/522 - (39%) Gaps:127/522 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LLLQVLVMDQVLG---QGP--PQTQVCPEQSEIAPCICTVK---------KNGLDILCETTDLAH 68
            ||:..|::..|.|   ..|  |....||.|     |.|.::         :....:.|....|..
Mouse     3 LLVAALLLSWVAGTTAAAPVVPWRVPCPPQ-----CACQIRPWYTPRSSYREATTVDCNDLFLTA 62

  Fly    69 ITKSMGTLKGKSPIIFYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQ 133
            :.                       |:|..      ..:.|.:.::|::.|::..|:.| |.||:
Mouse    63 VP-----------------------PRLPA------GTQTLLLQSNSISRIDQTELAYL-ANLTE 97

  Fly   134 LDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFR 198
            ||:|.|..........|.|..||.|:|..|::..:.:::|.||.:|:.|.|..|::.:|.|.||.
Mouse    98 LDLSQNSFSDARDCDFQALPQLLSLHLEENRLNRLEDHSFAGLTSLQELYLNHNQLCRISPRAFA 162

  Fly   199 GLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMIT 263
            ||          ||               |.:|.:..|.:|||....||.|.:|:.|::..|.:.
Mouse   163 GL----------GN---------------LLRLHLNSNLLRTIDSRWFEMLPNLEILMIGGNKVD 202

  Fly   264 TVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHL 328
            .:....|..|..|.||.|.|..:..|...|.:|| ::|:.|...|||:..:|..||..:..|:.|
Mouse   203 AILDMNFRPLANLRSLVLAGMSLREISDYALEGL-QSLESLSFYDNQLAQVPKRALEQVPGLKFL 266

  Fly   329 DLRNNNINVLAEDAFTGFGDSLTFLNLQK---NDIKVLPSL------------------------ 366
            ||..|.:..:      |.||....|:|::   |:::.|.|:                        
Mouse   267 DLNKNPLQRV------GPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSF 325

  Fly   367 ----LFENLNSLETLNLQNNKLQRIPQDIMEPVIDTLRIIDITDNPLNCSCELTWFPKLLEDLKN 427
                .|.:|..:|||.|.||.|..:.|..:|. :..|:.:.:..||:.|.|.:.|     .:...
Mouse   326 IHPRAFHHLPQMETLMLNNNALSALHQQTVES-LPNLQEVGLHGNPIRCDCVIRW-----ANATG 384

  Fly   428 KDDEMSQKKKPLCHMSLDNREYFVQAMPTEKM--HCAGLNVSPS--PTS----GGLMRILQVNIL 484
            ......:.:..||....|.:...|:.:|..:|  ||..| :||.  |:|    .|...:|....|
Mouse   385 THVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPL-ISPRSFPSSLQIASGESTVLHCRAL 448

  Fly   485 AQ 486
            |:
Mouse   449 AE 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 2/19 (11%)
LRR_RI 93..384 CDD:238064 88/321 (27%)
leucine-rich repeat 107..129 CDD:275380 5/21 (24%)
leucine-rich repeat 131..154 CDD:275380 8/22 (36%)
LRR_8 154..214 CDD:290566 20/59 (34%)
leucine-rich repeat 155..178 CDD:275380 8/22 (36%)
leucine-rich repeat 179..203 CDD:275380 10/23 (43%)
leucine-rich repeat 204..227 CDD:275380 2/22 (9%)
LRR_8 226..286 CDD:290566 19/59 (32%)
leucine-rich repeat 228..251 CDD:275380 9/22 (41%)
leucine-rich repeat 252..275 CDD:275380 5/22 (23%)
LRR_8 276..335 CDD:290566 22/58 (38%)
leucine-rich repeat 276..300 CDD:275380 9/23 (39%)
leucine-rich repeat 301..324 CDD:275380 8/22 (36%)
leucine-rich repeat 325..349 CDD:275380 7/23 (30%)
LRR_8 349..409 CDD:290566 18/90 (20%)
leucine-rich repeat 350..373 CDD:275380 7/53 (13%)
Lrrn2NP_034862.1 leucine-rich repeat 51..69 CDD:275380 4/40 (10%)
LRR_RI 62..288 CDD:238064 76/287 (26%)
leucine-rich repeat 71..94 CDD:275380 5/23 (22%)
leucine-rich repeat 95..118 CDD:275380 8/22 (36%)
LRR_8 117..177 CDD:290566 23/84 (27%)
leucine-rich repeat 119..142 CDD:275380 8/22 (36%)
leucine-rich repeat 143..166 CDD:275380 10/32 (31%)
LRR_8 166..222 CDD:290566 19/70 (27%)
leucine-rich repeat 167..190 CDD:275380 9/22 (41%)
leucine-rich repeat 191..214 CDD:275380 5/22 (23%)
LRR_RI 214..>372 CDD:238064 44/165 (27%)
LRR_8 214..273 CDD:290566 22/59 (37%)
leucine-rich repeat 215..238 CDD:275380 9/23 (39%)
leucine-rich repeat 239..262 CDD:275380 8/22 (36%)
leucine-rich repeat 263..286 CDD:275380 8/28 (29%)
leucine-rich repeat 287..311 CDD:275380 4/23 (17%)
LRR_8 310..371 CDD:290566 13/61 (21%)
leucine-rich repeat 312..334 CDD:275380 1/21 (5%)
leucine-rich repeat 337..360 CDD:275378 9/23 (39%)
leucine-rich repeat 361..373 CDD:275378 3/11 (27%)
TPKR_C2 369..412 CDD:301599 9/47 (19%)
I-set 430..514 CDD:254352 6/21 (29%)
Ig 438..514 CDD:299845 4/13 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X351
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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