DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14762 and RXFP2

DIOPT Version :9

Sequence 1:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_570718.1 Gene:RXFP2 / 122042 HGNCID:17318 Length:754 Species:Homo sapiens


Alignment Length:518 Identity:129/518 - (24%)
Similarity:199/518 - (38%) Gaps:137/518 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VVTVVLLLQVLVM----DQVLGQGPPQTQVCPEQSEIAPC-----------ICTVKK---NGLDI 59
            ::|:..||..:|:    |..|.||...|..|  |....||           .|..|.   ||.| 
Human    15 LITMFFLLHFIVLINVKDFALTQGSMITPSC--QKGYFPCGNLTKCLPRAFHCDGKDDCGNGAD- 76

  Fly    60 LCETTDLAHITKSMGTLKGKSPIIFYLKLRHNNLPKLQGFVFLALDIRHLTIHN--SSLAAIEEN 122
                      .::.|...|.:.|..                         |:|.  :|:|..:|.
Human    77 ----------EENCGDTSGWATIFG-------------------------TVHGNANSVALTQEC 106

  Fly   123 ALSS----LGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILT 183
            .|..    .....|:|:.....:|:||                     :|.||       :.:|:
Human   107 FLKQYPQCCDCKETELECVNGDLKSVP---------------------MISNN-------VTLLS 143

  Fly   184 LYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEG 248
            |.:|||             |            ::|.|.....:.|||:.:|.|.||.||...|.|
Human   144 LKKNKI-------------H------------SLPDKVFIKYTKLKKIFLQHNCIRHISRKAFFG 183

  Fly   249 LQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHT 313
            |.:|..|.|.||.|||:...:|..|..|..|.|:.|.|:.|.:..|.|| .:|.:|.:.:|.:..
Human   184 LCNLQILYLNHNCITTLRPGIFKDLHQLTWLILDDNPITRISQRLFTGL-NSLFFLSMVNNYLEA 247

  Fly   314 IPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLN 378
            :|.:....:.:|..:||..|.|..|....|... ||||.|.|.:|.|..:|...|.:|.:|..|:
Human   248 LPKQMCAQMPQLNWVDLEGNRIKYLTNSTFLSC-DSLTVLFLPRNQIGFVPEKTFSSLKNLGELD 311

  Fly   379 LQNNKLQRIPQDIMEPVIDTLRIIDITDNPL-----NCSCELTWFPKL-LE--DLKNKDDEMSQK 435
            |.:|.:..:...:.:. :..|:.::::.|||     |....|.....| ||  ::.|.:..|.|.
Human   312 LSSNTITELSPHLFKD-LKLLQKLNLSSNPLMYLHKNQFESLKQLQSLDLERIEIPNINTRMFQP 375

  Fly   436 KKPLCHMSLDNREYFVQAMPTEKMHCAGLNVSPSPTSGGLMRI--LQVNILAQIAVCSVAFLT 496
            .|.|.|:...|..|...| |..:: |       .|.:.|:...  |..|.:.:|.|..:||:|
Human   376 MKNLSHIYFKNFRYCSYA-PHVRI-C-------MPLTDGISSFEDLLANNILRIFVWVIAFIT 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 0/19 (0%)
LRR_RI 93..384 CDD:238064 79/296 (27%)
leucine-rich repeat 107..129 CDD:275380 6/27 (22%)
leucine-rich repeat 131..154 CDD:275380 5/22 (23%)
LRR_8 154..214 CDD:290566 9/59 (15%)
leucine-rich repeat 155..178 CDD:275380 3/22 (14%)
leucine-rich repeat 179..203 CDD:275380 5/23 (22%)
leucine-rich repeat 204..227 CDD:275380 2/22 (9%)
LRR_8 226..286 CDD:290566 26/59 (44%)
leucine-rich repeat 228..251 CDD:275380 12/22 (55%)
leucine-rich repeat 252..275 CDD:275380 10/22 (45%)
LRR_8 276..335 CDD:290566 17/58 (29%)
leucine-rich repeat 276..300 CDD:275380 9/23 (39%)
leucine-rich repeat 301..324 CDD:275380 4/22 (18%)
leucine-rich repeat 325..349 CDD:275380 7/23 (30%)
LRR_8 349..409 CDD:290566 16/59 (27%)
leucine-rich repeat 350..373 CDD:275380 9/22 (41%)
RXFP2NP_570718.1 LDLa 45..80 CDD:238060 9/47 (19%)
LRR 1 138..159 9/52 (17%)
leucine-rich repeat 139..162 CDD:275380 8/47 (17%)
LRR_RI <155..303 CDD:238064 53/149 (36%)
LRR_8 161..221 CDD:290566 26/59 (44%)
LRR 2 162..183 10/20 (50%)
leucine-rich repeat 163..186 CDD:275380 12/22 (55%)
LRR 3 186..207 9/20 (45%)
leucine-rich repeat 187..210 CDD:275380 10/22 (45%)
LRR 4 210..231 7/20 (35%)
leucine-rich repeat 211..234 CDD:275380 9/23 (39%)
LRR 5 234..255 4/20 (20%)
leucine-rich repeat 235..258 CDD:275380 4/22 (18%)
LRR 6 258..279 7/20 (35%)
leucine-rich repeat 259..282 CDD:275380 7/23 (30%)
LRR_8 282..341 CDD:290566 16/59 (27%)
LRR 7 282..303 9/20 (45%)
leucine-rich repeat 283..306 CDD:275380 9/22 (41%)
LRR_4 305..>341 CDD:289563 6/36 (17%)
LRR 8 306..327 4/20 (20%)
leucine-rich repeat 307..330 CDD:275380 4/23 (17%)
LRR 9 330..351 5/20 (25%)
LRR_8 331..383 CDD:290566 15/51 (29%)
leucine-rich repeat 331..354 CDD:275380 6/22 (27%)
LRR 10 354..375 5/20 (25%)
leucine-rich repeat 355..374 CDD:275380 5/18 (28%)
7tm_4 424..>628 CDD:304433 3/6 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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