DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc2 and SPE1

DIOPT Version :9

Sequence 1:NP_477053.2 Gene:Odc2 / 35767 FlyBaseID:FBgn0013308 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_012737.1 Gene:SPE1 / 853651 SGDID:S000001667 Length:466 Species:Saccharomyces cerevisiae


Alignment Length:438 Identity:154/438 - (35%)
Similarity:225/438 - (51%) Gaps:77/438 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QYYDEELNIRKVI----EQADLEHLD---------QALN--------------------ICDLSS 40
            |||.:...:..::    ...|||.|.         |||.                    ||||..
Yeast    30 QYYKDGETLHNLLLELKNNQDLELLPHEQAHPKIFQALKARIGRINNETCDPGEENSFFICDLGE 94

  Fly    41 LERKLRLWHKLMPRIEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKLVLGLGVSPERIIFAH 105
            ::|....|.|.:|||:|.||||||.|..|:..||:||..||||||.|:..||.:.:||:||::|:
Yeast    95 VKRLFNNWVKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDRVLSMNISPDRIVYAN 159

  Fly   106 PCRPASHLRYAKEQQVVNGTVDNEYEIYKLRKHYPDSNLIVRFKSEAKKALCPLGDKYGCDAEAD 170
            ||:.||.:|||..:.|:..|.||..|::|::|.:|:|.|::|..::...|.|.|..||||:.| :
Yeast   160 PCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIATDDSTAQCRLSTKYGCEME-N 223

  Fly   171 AAALMLLAKALGLKVTGTSFHVGSGCSEVEAYDRAIEKAENIF-KVGEMIG-HKMELLDVGGGFP 233
            ...|:...|.|||.:.|.|||||||.|:..:..:|:..|..:| |.....| ..:::||||||| 
Yeast   224 VDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDARTVFDKAANEYGLPPLKILDVGGGF- 287

  Fly   234 GIDDEMFEEIAQSVNTSVELRFP-DKRIRIISEPGRFFVEAAYTLICKVHAKREVRSKDGKLDTM 297
              ..|.|:|....:..::|..|| ...:.||:||||:||..|:||...|.|||::...:.     
Yeast   288 --QFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEA----- 345

  Fly   298 MYYLNDGIFGAFAGMFYYPEEVAP-------ELYLDEAESLPKL-------------KSVIWGPS 342
            |.|.|||::|....:.:..:|..|       |.:.|:.||...:             |..||||:
Yeast   346 MIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEFHYDDFESTTAVLDSINKTRSEYPYKVSIWGPT 410

  Fly   343 CDAMDKIS-------DLLLPNLNPGDLLGFRNMGAYTMPIASPFNGFD 383
            ||.:|.|:       |:::     ||...|..:||||...|:.||||:
Yeast   411 CDGLDCIAKEYYMKHDVIV-----GDWFYFPALGAYTSSAATQFNGFE 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc2NP_477053.2 LysA 21..385 CDD:223098 151/426 (35%)
PLPDE_III_ODC 30..390 CDD:143482 147/413 (36%)
SPE1NP_012737.1 PLPDE_III_ODC 84..460 CDD:143482 144/384 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344107
Domainoid 1 1.000 184 1.000 Domainoid score I684
eggNOG 1 0.900 - - E1_COG0019
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1906
Inparanoid 1 1.050 260 1.000 Inparanoid score I628
Isobase 1 0.950 - 0 Normalized mean entropy S945
OMA 1 1.010 - - QHG62480
OrthoFinder 1 1.000 - - FOG0000435
OrthoInspector 1 1.000 - - otm46600
orthoMCL 1 0.900 - - OOG6_100277
Panther 1 1.100 - - O PTHR11482
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X335
TreeFam 1 0.960 - -
1514.710

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