DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc2 and AT5G11880

DIOPT Version :9

Sequence 1:NP_477053.2 Gene:Odc2 / 35767 FlyBaseID:FBgn0013308 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_568252.1 Gene:AT5G11880 / 831061 AraportID:AT5G11880 Length:489 Species:Arabidopsis thaliana


Alignment Length:349 Identity:91/349 - (26%)
Similarity:148/349 - (42%) Gaps:48/349 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 YAVKCNDDPVVVKFLADLGTGFDCASKNELKLVLGLGVSPERIIFAHPCRPASHLRYAKEQQV-V 122
            ||:|.|::..:::.|..||.|....|.|||:|.|..|..|.:.||....:....|..|.::.| |
plant   127 YAIKANNNLKILEHLRSLGCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVFV 191

  Fly   123 NGTVDNEYEIYKL----RKHYPDSNLIVRFKSEAKKALCPL------GDKYGCDAEADAAAL-ML 176
            |  ||:|:::..:    |......|:::|...:....:.|.      ..|:|...|.....| .:
plant   192 N--VDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEV 254

  Fly   177 LAKALGLKVTGTSFHVGSGCSEVEAY-DRAIEKAENIFKVGEMIGHKMELLDVGGGFPGID---- 236
            .|....||:.|...|:||..::|:.: |.|:...|.|.::... |.::..|::|||. |||    
plant   255 KAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQ-GFEVSYLNIGGGL-GIDYYHA 317

  Fly   237 DEMFEEIAQSVNTSVELRFPDKRIRIISEPGRFFVEAAYTLICKVHAKREVRSKDGKLDTMMYYL 301
            ..:.......:||..||.. .:.:.:|.||||..:.   ...|.|:....|::.    .|..:.:
plant   318 GAVLPTPMDLINTVRELVL-SRDLNLIIEPGRSLIA---NTCCFVNHVTGVKTN----GTKNFIV 374

  Fly   302 NDGIFGAFAGMFYYPEEVAPELY-----LDEAESLPKLKSV----IWGPSCDAMDKI-SDLLLPN 356
            .||...         |.:.|.||     ::.....|....|    :.||.|::.|.: .|..||.
plant   375 IDGSMA---------ELIRPSLYDAYQHIELVSPTPPEAEVTKFDVVGPVCESADFLGKDRELPT 430

  Fly   357 LNPGDLLGFRNMGAYTMPIASPFN 380
            ...|..|...:.|||.|.:||.:|
plant   431 PPQGAGLVVHDAGAYCMSMASTYN 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc2NP_477053.2 LysA 21..385 CDD:223098 91/349 (26%)
PLPDE_III_ODC 30..390 CDD:143482 91/349 (26%)
AT5G11880NP_568252.1 PLN02537 80..489 CDD:178152 91/349 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 52 1.000 Domainoid score I4265
eggNOG 1 0.900 - - E1_COG0019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I2473
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D725914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1172
orthoMCL 1 0.900 - - OOG6_100277
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.770

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