DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc2 and ODC1

DIOPT Version :9

Sequence 1:NP_477053.2 Gene:Odc2 / 35767 FlyBaseID:FBgn0013308 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001274118.1 Gene:ODC1 / 4953 HGNCID:8109 Length:461 Species:Homo sapiens


Alignment Length:404 Identity:164/404 - (40%)
Similarity:237/404 - (58%) Gaps:27/404 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NGDLRIQYYDEELNIRKVIEQA--DLEHLD--QALNICDLSSLERKLRLWHKLMPRIEPHYAVKC 63
            |.:....:.||....:.:::|.  ::...|  .|..:.||..:.:|...|.|.:||:.|.|||||
Human     6 NEEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKC 70

  Fly    64 NDDPVVVKFLADLGTGFDCASKNELKLVLGLGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDN 128
            ||...:||.||..|||||||||.|::||..|||.|||||:|:||:..|.::||....|...|.|:
Human    71 NDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDS 135

  Fly   129 EYEIYKLRKHYPDSNLIVRFKSEAKKALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVG 193
            |.|:.|:.:.:|.:.|::|..::..||:|.|..|:|..... :..|:..||.|.:.|.|.|||||
Human   136 EVELMKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLRT-SRLLLERAKELNIDVVGVSFHVG 199

  Fly   194 SGCSEVEAYDRAIEKAENIFKVGEMIGHKMELLDVGGGFPGIDDE--MFEEIAQSVNTSVELRFP 256
            |||::.|.:.:||..|..:|.:|..:|..|.|||:||||||.:|.  .||||...:|.:::..||
Human   200 SGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFP 264

  Fly   257 -DKRIRIISEPGRFFVEAAYTLICKVHAKREV-RSKDGKLD-------TMMYYLNDGIFGAFAGM 312
             |..:|||:||||::|.:|:||...:.||:.| :.:.|..|       |.|||:|||::|:|..:
Human   265 SDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCI 329

  Fly   313 FYYPEEVAPELYLDEAESLPK-----LKSVIWGPSCDAMDKISDLL-LPNLNPGDLLGFRNMGAY 371
            .|....|.|.|     :..||     ..|.||||:||.:|:|.:.. ||.::.||.:.|.|||||
Human   330 LYDHAHVKPLL-----QKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAY 389

  Fly   372 TMPIASPFNGFDVP 385
            |:..||.||||..|
Human   390 TVAAASTFNGFQRP 403

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Odc2NP_477053.2 LysA 21..385 CDD:223098 160/384 (42%)
PLPDE_III_ODC 30..390 CDD:143482 160/375 (43%)
ODC1NP_001274118.1 PLPDE_III_ODC 37..408 CDD:143482 159/373 (43%)
Pyridoxal phosphate binding. /evidence=ECO:0000269|PubMed:17407445, ECO:0000269|PubMed:26305948, ECO:0000269|PubMed:26443277, ECO:0007744|PDB:2OO0 274..277 2/2 (100%)