DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc2 and spe1

DIOPT Version :10

Sequence 1:NP_477053.2 Gene:Odc2 / 35767 FlyBaseID:FBgn0013308 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_594665.1 Gene:spe1 / 2542855 PomBaseID:SPAC144.04C Length:432 Species:Schizosaccharomyces pombe


Alignment Length:370 Identity:151/370 - (40%)
Similarity:230/370 - (62%) Gaps:22/370 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EQADLEHLDQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCNDDPVVVKFLADLGTGFDCASKN 86
            |.||    ..|..:.||:.:.|:|..||..:||::|.||||||.||.|:..|...|||||||||.
pombe    62 EPAD----SDAFFVADLNGVYRQLLRWHAKLPRVQPFYAVKCNPDPKVLALLNKFGTGFDCASKG 122

  Fly    87 ELKLVLGLGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEYEIYKLRKHYPDSNLIVRFKSE 151
            ||:.:|||||||:||::|:||:..:::|||..:.:...|.||..|:||:::|:|:|.|::|..::
pombe   123 ELEQILGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLRISTD 187

  Fly   152 AKKALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVGSGCSEVEAYDRAIEKAENIFKVG 216
            ...:||.|..|:|...: |...|:.:||:|.|.|.|.|||||||..:..|:..||:::..:|..|
pombe   188 DSNSLCRLSLKFGASLD-DTGKLLDIAKSLELNVVGVSFHVGSGSYDPSAFLDAIQRSRQVFDQG 251

  Fly   217 EMIGHKMELLDVGGGFPGIDDEMFEEIAQSVNTSVELRFPDKRIRIISEPGRFFVEAAYTLICKV 281
            ...|...:|||:||||.   ::.|:.:|..:.::::..| |..||:|||||||||.:::||...|
pombe   252 LERGFNFDLLDIGGGFM---NDSFDGVADLIRSALDTYF-DPSIRVISEPGRFFVSSSFTLAVNV 312

  Fly   282 HAKREVRSKDGKLDTMMYYLNDGIFGAF-AGMFYYPEEVAPEL------YLDEAESLPKLKSVIW 339
            .|||::..:    :.:|||:|||::|:. ..:|.:...||..|      ..::.....:.:..||
pombe   313 IAKRKLDDE----EKVMYYVNDGVYGSLNCILFDHQHPVARVLKCGSRFVYNDLVGTGQHRCFIW 373

  Fly   340 GPSCDAMDKI-SDLLLP-NLNPGDLLGFRNMGAYTMPIASPFNGF 382
            ||:||::|.| :|..|| .||.||.:.|.:.||||:..||.||||
pombe   374 GPTCDSLDVIANDAHLPYELNVGDWIYFEDAGAYTVAAASCFNGF 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc2NP_477053.2 PLPDE_III_ODC 30..390 CDD:143482 148/362 (41%)
spe1NP_594665.1 PLPDE_III_ODC 67..426 CDD:143482 148/361 (41%)

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