DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc2 and odc1

DIOPT Version :10

Sequence 1:NP_477053.2 Gene:Odc2 / 35767 FlyBaseID:FBgn0013308 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_571876.1 Gene:odc1 / 114426 ZFINID:ZDB-GENE-010816-1 Length:461 Species:Danio rerio


Alignment Length:406 Identity:161/406 - (39%)
Similarity:238/406 - (58%) Gaps:18/406 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DLRIQYYDEELNIRKVIEQ----ADLEHLDQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCND 65
            |....:.:|....|.::||    :.|.....|..:.||..:.:|...|.:::|||.|.|||||||
Zfish     8 DFDFAFLEEGFCARDIVEQKINESSLSDDKDAFYVADLGDVLKKHLRWLRVLPRITPFYAVKCND 72

  Fly    66 DPVVVKFLADLGTGFDCASKNELKLVLGLGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEY 130
            ...||..||.||.|||||||.|:::|..:||.|.|||:|:||:..|.::||....|...|.|:|.
Zfish    73 SRAVVTTLASLGAGFDCASKTEIQIVQSVGVDPSRIIYANPCKQVSQIKYASAHGVQMMTFDSEV 137

  Fly   131 EIYKLRKHYPDSNLIVRFKSEAKKALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVGSG 195
            |:.|:.:.:.::.|::|..::..||:|.|..|:|...:: :..|:..||.|||.|.|.|||||||
Zfish   138 ELMKVARSHENAKLVLRIATDDSKAVCRLSVKFGATLKS-SRLLLERAKELGLDVIGVSFHVGSG 201

  Fly   196 CSEVEAYDRAIEKAENIFKVGEMIGHKMELLDVGGGFPGIDDE--MFEEIAQSVNTSVELRFP-D 257
            |::.|.|.:||..|..:|.:|..:|:.|.|||:||||||.:|.  .|||||..:|.:::..|| |
Zfish   202 CTDPETYSQAISDARYVFDIGAELGYNMSLLDIGGGFPGSEDTKLKFEEIAAVINPALDKYFPVD 266

  Fly   258 KRIRIISEPGRFFVEAAYTLICKVHAKREVRSKDGKLD---------TMMYYLNDGIFGAFAGMF 313
            ..:|||:||||::|.:||||...:.||:.:..:....|         |:|||:|||::|:|..:.
Zfish   267 SGVRIIAEPGRYYVASAYTLAVNIIAKKVIMKEQSASDEEEDVSNDRTLMYYVNDGVYGSFNCIL 331

  Fly   314 YYPEEVAPELYLDEAESLPKLKSVIWGPSCDAMDKI-SDLLLPNLNPGDLLGFRNMGAYTMPIAS 377
            |....|.|.|:.............||||:||.:|:| ....||::..||.|.|.||||||:..:|
Zfish   332 YDHAHVLPTLHKKPKPDERMYPCSIWGPTCDGLDRIVEQCSLPDMQVGDWLLFENMGAYTVAASS 396

  Fly   378 PFNGFDVPETRFFKAK 393
            .||||..|:..:..::
Zfish   397 TFNGFQKPDIYYIMSR 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc2NP_477053.2 PLPDE_III_ODC 30..390 CDD:143482 155/372 (42%)
odc1NP_571876.1 PLPDE_III_ODC 37..409 CDD:143482 155/372 (42%)

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