DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Odc2 and LOC100498594

DIOPT Version :9

Sequence 1:NP_477053.2 Gene:Odc2 / 35767 FlyBaseID:FBgn0013308 Length:393 Species:Drosophila melanogaster
Sequence 2:XP_031752789.1 Gene:LOC100498594 / 100498594 -ID:- Length:507 Species:Xenopus tropicalis


Alignment Length:388 Identity:147/388 - (37%)
Similarity:226/388 - (58%) Gaps:12/388 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DEELNIRKVIEQADLEHL----DQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCNDDPVVVKF 72
            |:.:::::.::|..:.:.    :.|..:.||..:.:|...:.|.:||::|.||:|||....|::.
 Frog    95 DKGMSVQQFVKQKSISNSASGNEDAFYVADLGDIIKKYWQFSKGLPRVKPFYAMKCNSTRAVLQM 159

  Fly    73 LADLGTGFDCASKNELKLVLGLGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEYEIYKLRK 137
            ||.|||||.|.|..||.:||.:||....|:|.:||:..||:|||.|..|...|.|.|.|:.||..
 Frog   160 LAFLGTGFACCSMAELDMVLRMGVPAADIVFVNPCKQVSHIRYAAEYGVRKMTFDCESELLKLAA 224

  Fly   138 HYPDSNLIVRFKSEAKKALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVGSGCSEVEAY 202
            .||.:.:|::..::.|:....|....|... ::...|:..||:|.:.|.|.|||.||.|.:..::
 Frog   225 SYPQAEMILQIVTDNKEPWHTLSGICGVYI-SECENLLKKAKSLNMDVFGVSFHTGSRCKDTHSF 288

  Fly   203 DRAIEKAENIFKVGEMIGHKMELLDVGGGFPGIDDE---MFEEIAQSVNTSVELRFP-DKRIRII 263
            .:|||.|..:|.:|:.:||:|.|||:|||||| |.|   .||:.|:.:..|::..|| ::.::||
 Frog   289 HKAIEDARKVFDIGKNLGHQMRLLDIGGGFPG-DSESRPTFEKFAEVIRISLDQSFPCNEDVQII 352

  Fly   264 SEPGRFFVEAAYTLICKVHAKREVRSKDG-KLDTMMYYLNDGIFGAFAGMFYYPEEVAPELYLDE 327
            :|||||:|.:|:|....:..|:.|..||| :.....|.|||||||:|...:...||..|.:..|.
 Frog   353 AEPGRFYVTSAFTAALNIVTKKVVTKKDGEERRQFSYVLNDGIFGSFFLNYMQMEETWPVVGKDF 417

  Fly   328 AESLPKLKSVIWGPSCDAMDKI-SDLLLPNLNPGDLLGFRNMGAYTMPIASPFNGFDVPETRF 389
            ..:.....|::|||:|.:.||| .|:.||.|..||.:.|.|||||:|.:.|.||.|..|:..|
 Frog   418 DTAQELFPSILWGPTCASEDKIVKDIDLPELEMGDWIIFPNMGAYSMSMTSNFNAFSTPKIYF 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc2NP_477053.2 LysA 21..385 CDD:223098 144/373 (39%)
PLPDE_III_ODC 30..390 CDD:143482 145/366 (40%)
LOC100498594XP_031752789.1 PLPDE_III_ODC 117..481 CDD:143482 145/366 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 329 1.000 Inparanoid score I2407
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D306092at33208
OrthoFinder 1 1.000 - - FOG0000435
OrthoInspector 1 1.000 - - mtm9417
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X335
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.