DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc1 and SPE1

DIOPT Version :9

Sequence 1:NP_477052.2 Gene:Odc1 / 35766 FlyBaseID:FBgn0013307 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_012737.1 Gene:SPE1 / 853651 SGDID:S000001667 Length:466 Species:Saccharomyces cerevisiae


Alignment Length:414 Identity:167/414 - (40%)
Similarity:231/414 - (55%) Gaps:52/414 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ATPEIQFYERELNIRRVIEE-CDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDP 67
            |.|:| |...:..|.|:..| ||... :.:..||||..|:|....|.|.|||||||||||||.|.
Yeast    59 AHPKI-FQALKARIGRINNETCDPGE-ENSFFICDLGEVKRLFNNWVKELPRIKPFYAVKCNPDT 121

  Fly    68 MVVRLLAQLGAGFDCASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEV 132
            .|:.|||:||..||||||.|:..||..::||:||::||||:..|.:.||....|...|.||..|:
Yeast   122 KVLSLLAELGVNFDCASKVEIDRVLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEEL 186

  Fly   133 YKLHTHYPNSNLIVRFKSEAKEAQCPLGDKFGCDAD-VDAAALMLLAKSLELKVTGTSFHVGSGC 196
            :|:...:|.|.|::|..::...|||.|..|:||:.: ||  .|:...|.|.|.:.|.|||||||.
Yeast   187 HKIKKFHPESQLLLRIATDDSTAQCRLSTKYGCEMENVD--VLLKAIKELGLNLAGVSFHVGSGA 249

  Fly   197 SELQAYDRAIKKAKNLF-----KFGALLGYDMDFLDIGGGFPGSDDVKFEKIAES---VNTSVQR 253
            |:..:..:|::.|:.:|     ::|.   ..:..||:||||      :||...||   :..:::.
Yeast   250 SDFTSLYKAVRDARTVFDKAANEYGL---PPLKILDVGGGF------QFESFKESTAVLRLALEE 305

  Fly   254 HFP-DERVHIIAEPGRFFVAAACTLVCKIHAKREI-RNEAGKLDTVMYYLNDGVYGSFNCILYDH 316
            .|| ...|.|||||||:|||.|.||...:.|||:: .|||      |.|.||||||:.||||:||
Yeast   306 FFPVGCGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEA------MIYTNDGVYGNMNCILFDH 364

  Fly   317 QVV--------IAEHYLDNAESLPHLKSL------------IWGPSCDALDKISEDLHLP-NLNR 360
            |..        :..||.|...:...|.|:            ||||:||.||.|:::.::. ::..
Yeast   365 QEPHPRTLYHNLEFHYDDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIV 429

  Fly   361 GDLLGFRNMGAYTMPIASAFNGFE 384
            ||...|..:||||...|:.|||||
Yeast   430 GDWFYFPALGAYTSSAATQFNGFE 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc1NP_477052.2 LysA 16..391 CDD:223098 163/402 (41%)
PLPDE_III_ODC 30..391 CDD:143482 158/387 (41%)
SPE1NP_012737.1 PLPDE_III_ODC 84..460 CDD:143482 158/387 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344106
Domainoid 1 1.000 184 1.000 Domainoid score I684
eggNOG 1 0.900 - - E1_COG0019
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1906
Inparanoid 1 1.050 260 1.000 Inparanoid score I628
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62480
OrthoFinder 1 1.000 - - FOG0000435
OrthoInspector 1 1.000 - - otm46600
orthoMCL 1 0.900 - - OOG6_100277
Panther 1 1.100 - - LDO PTHR11482
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R297
SonicParanoid 1 1.000 - - X335
TreeFam 1 0.960 - -
1514.790

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